G1702787


Basic Information

Item Value
gene id G1702787
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 5019730 ~ 5020339 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1949049
GTATATGAATGAATAGGCAGGTCCACACCTACTGTATATGAATGAACAGACAGGtccatacctactgtatatgaaTGAATAGGCAGGtccatacctactgtatatgaaTGAATAGGCAGGTCCttacatacctactgtatatgaaTGAATAGGCAGGtccatacctactgtatatgaaTGAATAGGCAGGtccatacctactgtatatgaaTGAATAGGCAGGtccatacctactgtatatgaaTGAATAGGCAGGtccatacctactgtatatgaaTGAATAGGCAGGTCCACACCTACTGTATATGAATGAATAGGCAGGTCCATACCTACCTACTGTCCAACGCCAAATGTCCATAGAGTTCAAAAGTACCTTGTAAACTGTTGGTTTTAAAATTCATATTGCTTATTTTTGGGGGATCAAATGTTAATAAATAGAGTTAAAAATACTATGGTGCCTGGTGAACGGTTTCCTTCTCTGAACGGATTCCTTCTCTGAACGGGTCTCCTTCTCTGAACGGGTCTCCTTCTCTGAACGGG

Function

NR:

description
PREDICTED: putative cyclin-dependent serine/threonine-protein kinase DDB_G0272797/DDB_G0274007

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1949049 True 540 lncRNA 0.40 2 5019730 5020339

Neighbor

gene id symbol gene type direction distance location
LOC118942787 LOC106594295 coding upstream 166813 4851989 ~ 4852917 (+)
si:dkey-39a18.1 LOC106576636 coding upstream 544639 4451116 ~ 4475091 (+)
LOC118942831 LOC106576636 coding upstream 558159 4459746 ~ 4461571 (+)
LOC110516816 LOC107655592 coding upstream 578494 4384016 ~ 4441236 (+)
helb LOC106599032 coding upstream 1436232 3565639 ~ 3583498 (+)
LOC110490690 nu107 coding downstream 99781 5120120 ~ 5173429 (+)
LOC118942832 LOC106576641 coding downstream 153321 5173660 ~ 5179939 (+)
LOC118942833 NA coding downstream 155156 5175495 ~ 5176684 (+)
LOC110516940 LOC106609861 coding downstream 162572 5182911 ~ 5200193 (+)
LOC118942835 LOC106576675 coding downstream 320195 5340534 ~ 5350434 (+)
G1702785 NA non-coding upstream 3728 5015457 ~ 5016002 (+)
G1702784 NA non-coding upstream 5768 5013017 ~ 5013962 (+)
G1702765 NA non-coding upstream 42865 4976387 ~ 4976865 (+)
G1702762 NA non-coding upstream 47845 4971400 ~ 4971885 (+)
G1702761 NA non-coding upstream 48465 4970944 ~ 4971265 (+)
G1702789 NA non-coding downstream 20494 5040833 ~ 5041623 (+)
G1702792 NA non-coding downstream 30671 5051010 ~ 5052163 (+)
G1702794 NA non-coding downstream 32823 5053162 ~ 5055310 (+)
G1702795 NA non-coding downstream 33226 5053565 ~ 5055750 (+)
G1702797 NA non-coding downstream 41264 5061603 ~ 5063396 (+)
G1702554 NA other upstream 624215 4394993 ~ 4395515 (+)
G1701654 NA other upstream 1083693 3932787 ~ 3936037 (+)
G1701596 NA other upstream 1243469 3774039 ~ 3776261 (+)
G1701265 NA other upstream 2170127 2844704 ~ 2849603 (+)
G1702793 NA other downstream 32108 5052447 ~ 5054464 (+)
G1702856 NA other downstream 233826 5254165 ~ 5254885 (+)
LOC110511233 LOC107655547 other downstream 565192 5563222 ~ 5598052 (+)
G1703391 NA other downstream 696860 5717199 ~ 5717701 (+)

Expression


Co-expression Network