Gene
RNA
| Item | Value |
|---|---|
| gene id | G1703143 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 5048455 ~ 5049706 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Ice nucleation protein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1949617 | True | 268 | lncRNA | 0.48 | 2 | 5048455 | 5049706 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118936570 | mdm1 | coding | downstream | 78064 | 4932214 ~ 4970391 (-) |
| ifng | ifngamma1 | coding | downstream | 270374 | 4756753 ~ 4778081 (-) |
| LOC118942988 | NA | coding | downstream | 319724 | 4723028 ~ 4728731 (-) |
| LOC110516460 | LOC106593189 | coding | downstream | 343932 | 4692883 ~ 4704523 (-) |
| LOC110499732 | dyrk2 | coding | downstream | 411920 | 4611882 ~ 4636619 (-) |
| LOC118942989 | NA | coding | upstream | 2912 | 5052618 ~ 5060318 (-) |
| LOC110518655 | LOC106592876 | coding | upstream | 153108 | 5202814 ~ 5224336 (-) |
| LOC118942990 | NA | coding | upstream | 176363 | 5226069 ~ 5228087 (-) |
| LOC118942834 | LOC106576655 | coding | upstream | 186534 | 5236240 ~ 5313033 (-) |
| LOC118942837 | b2mg | coding | upstream | 371168 | 5420336 ~ 5426626 (-) |
| G1703141 | NA | non-coding | downstream | 6276 | 5040187 ~ 5042179 (-) |
| G1703127 | NA | non-coding | downstream | 9747 | 5014764 ~ 5038708 (-) |
| G1703133 | NA | non-coding | downstream | 22756 | 5024686 ~ 5025699 (-) |
| G1703124 | NA | non-coding | downstream | 35865 | 5011734 ~ 5012590 (-) |
| G1703123 | NA | non-coding | downstream | 37562 | 5009887 ~ 5010893 (-) |
| G1703144 | NA | non-coding | upstream | 153 | 5049859 ~ 5050239 (-) |
| G1703145 | NA | non-coding | upstream | 2378 | 5052084 ~ 5070681 (-) |
| G1703147 | NA | non-coding | upstream | 5616 | 5055322 ~ 5055821 (-) |
| G1703148 | NA | non-coding | upstream | 6507 | 5056213 ~ 5056822 (-) |
| G1703109 | NA | non-coding | upstream | 38399 | 5088105 ~ 5113038 (-) |
| G1703085 | NA | other | downstream | 101044 | 4946598 ~ 4947411 (-) |
| G1702914 | NA | other | downstream | 603536 | 4442249 ~ 4444919 (-) |
| LOC110499739 | grip1 | other | downstream | 1459868 | 3585864 ~ 4306764 (-) |
| G1702141 | NA | other | downstream | 1530078 | 3281102 ~ 3518377 (-) |
| G1703190 | NA | other | upstream | 151121 | 5200387 ~ 5202057 (-) |
| G1703200 | NA | other | upstream | 182929 | 5232635 ~ 5235225 (-) |
| G1703323 | NA | other | upstream | 379762 | 5429468 ~ 5430889 (-) |
