G1702797


Basic Information

Item Value
gene id G1702797
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 5061603 ~ 5063396 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1949063
GATGTGATGTCATCGGTTCTTCTGCTGTTTGATGCCGTGCAACCGTGGTAATTATTATCGTTCATAGCCCCACCAAAAACACACATGGCAGTGTGTCAAGTAACGATCAGGGCACATTTTTGGCATGAATTGCTTTGCAAAAGTGTTTGATTGTAAATGGAAACATTTCTCTCAGAAAGAGTTCCTGTCCTATCAAAGCTCTTAACTTAAAAACTGAGAGGAAAATATAACTAcagtcttctgtctgtctgtatattactgttgttgttgttgttgttgttgttgttgttgttgttgttgttgtaatgaaccattaactagtcttctgtctgtctgtatattactgttgttgttgttgtaatgaaccattaactagtcttctgtctgtctgtatattactgttgttgtaatgaaacattaactagtcttctgtctgtctgtatattactgttgtaatgaaacattaactagtcttctgtctgtctgtatattactgttgtaatgaaccattaactagtcttctgtctgtctgtatattactgttgtaatgaaacattaactagtcttctgtctgtctgtatattactgttgttgttgtaatgaaccattaactagtcttctgtctgtctgtatattactgttgtaatgaaacattaactagtcttctgtctgtctgtatattactgttgttgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1949063 True 693 lncRNA 0.34 5 5061603 5063396

Neighbor

gene id symbol gene type direction distance location
LOC118942787 LOC106594295 coding upstream 208686 4851989 ~ 4852917 (+)
si:dkey-39a18.1 LOC106576636 coding upstream 586512 4451116 ~ 4475091 (+)
LOC118942831 LOC106576636 coding upstream 600032 4459746 ~ 4461571 (+)
LOC110516816 LOC107655592 coding upstream 620367 4384016 ~ 4441236 (+)
helb LOC106599032 coding upstream 1478105 3565639 ~ 3583498 (+)
LOC110490690 nu107 coding downstream 56724 5120120 ~ 5173429 (+)
LOC118942832 LOC106576641 coding downstream 110264 5173660 ~ 5179939 (+)
LOC118942833 NA coding downstream 112099 5175495 ~ 5176684 (+)
LOC110516940 LOC106609861 coding downstream 119515 5182911 ~ 5200193 (+)
LOC118942835 LOC106576675 coding downstream 277138 5340534 ~ 5350434 (+)
G1702795 NA non-coding upstream 5853 5053565 ~ 5055750 (+)
G1702794 NA non-coding upstream 6293 5053162 ~ 5055310 (+)
G1702792 NA non-coding upstream 9440 5051010 ~ 5052163 (+)
G1702789 NA non-coding upstream 19980 5040833 ~ 5041623 (+)
G1702787 NA non-coding upstream 41264 5019730 ~ 5020339 (+)
G1702805 NA non-coding downstream 27662 5091058 ~ 5091542 (+)
G1702807 NA non-coding downstream 31578 5094974 ~ 5095659 (+)
G1702811 NA non-coding downstream 54740 5118136 ~ 5118564 (+)
G1702813 NA non-coding downstream 56248 5119644 ~ 5119857 (+)
G1702735 NA non-coding downstream 80248 5143644 ~ 5167820 (+)
G1702793 NA other upstream 7139 5052447 ~ 5054464 (+)
G1702554 NA other upstream 666088 4394993 ~ 4395515 (+)
G1701654 NA other upstream 1125566 3932787 ~ 3936037 (+)
G1701596 NA other upstream 1285342 3774039 ~ 3776261 (+)
G1702856 NA other downstream 190769 5254165 ~ 5254885 (+)
LOC110511233 LOC107655547 other downstream 522135 5563222 ~ 5598052 (+)
G1703391 NA other downstream 653803 5717199 ~ 5717701 (+)
G1703427 LOC106590880 other downstream 919949 5983345 ~ 5994810 (+)

Expression


Co-expression Network