Gene
RNA
| Item | Value |
|---|---|
| gene id | G1703174 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 5128437 ~ 5128977 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: clumping factor B-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1949651 | True | 459 | lncRNA | 0.49 | 2 | 5128437 | 5128977 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118942989 | NA | coding | downstream | 68119 | 5052618 ~ 5060318 (-) |
| LOC118936570 | mdm1 | coding | downstream | 158046 | 4932214 ~ 4970391 (-) |
| ifng | ifngamma1 | coding | downstream | 350356 | 4756753 ~ 4778081 (-) |
| LOC118942988 | NA | coding | downstream | 399706 | 4723028 ~ 4728731 (-) |
| LOC110516460 | LOC106593189 | coding | downstream | 423914 | 4692883 ~ 4704523 (-) |
| LOC110518655 | LOC106592876 | coding | upstream | 73837 | 5202814 ~ 5224336 (-) |
| LOC118942990 | NA | coding | upstream | 97092 | 5226069 ~ 5228087 (-) |
| LOC118942834 | LOC106576655 | coding | upstream | 107263 | 5236240 ~ 5313033 (-) |
| LOC118942837 | b2mg | coding | upstream | 291897 | 5420336 ~ 5426626 (-) |
| LOC110491894 | b2m | coding | upstream | 306299 | 5435276 ~ 5452253 (-) |
| G1703171 | NA | non-coding | downstream | 4827 | 5123059 ~ 5123610 (-) |
| G1703169 | NA | non-coding | downstream | 7228 | 5120876 ~ 5121209 (-) |
| G1703167 | NA | non-coding | downstream | 10243 | 5117751 ~ 5118194 (-) |
| G1703108 | NA | non-coding | downstream | 13992 | 5113139 ~ 5114445 (-) |
| G1703165 | NA | non-coding | downstream | 20920 | 5107220 ~ 5107517 (-) |
| G1703183 | NA | non-coding | upstream | 46260 | 5175237 ~ 5177003 (-) |
| G1703184 | NA | non-coding | upstream | 50250 | 5179227 ~ 5179912 (-) |
| G1703185 | NA | non-coding | upstream | 51697 | 5180674 ~ 5181073 (-) |
| G1703190 | NA | non-coding | upstream | 71410 | 5200387 ~ 5202057 (-) |
| G1703085 | NA | other | downstream | 181026 | 4946598 ~ 4947411 (-) |
| G1702914 | NA | other | downstream | 683518 | 4442249 ~ 4444919 (-) |
| LOC110499739 | grip1 | other | downstream | 1539850 | 3585864 ~ 4306764 (-) |
| G1702141 | NA | other | downstream | 1610060 | 3281102 ~ 3518377 (-) |
| G1703200 | NA | other | upstream | 103658 | 5232635 ~ 5235225 (-) |
| G1703323 | NA | other | upstream | 300491 | 5429468 ~ 5430889 (-) |
