Gene
RNA
| Item | Value |
|---|---|
| gene id | G1703190 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 5200387 ~ 5202057 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106594601 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1949683 | False | 758 | lncRNA | 0.45 | 5 | 5200387 | 5202057 |
| TU1949684 | False | 876 | lncRNA | 0.46 | 3 | 5200387 | 5202057 |
| TU1949685 | False | 838 | lncRNA | 0.46 | 5 | 5200387 | 5202057 |
| TU1949686 | False | 606 | lncRNA | 0.44 | 4 | 5200387 | 5202057 |
| TU1949688 | False | 334 | lncRNA | 0.41 | 2 | 5200387 | 5200758 |
| TU1949689 | False | 720 | lncRNA | 0.45 | 5 | 5200387 | 5202057 |
| TU1949690 | False | 717 | lncRNA | 0.45 | 4 | 5200387 | 5202057 |
| TU1949687 | True | 702 | TUCP | 0.49 | 5 | 5200827 | 5202057 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118942989 | NA | coding | downstream | 140069 | 5052618 ~ 5060318 (-) |
| LOC118936570 | mdm1 | coding | downstream | 229996 | 4932214 ~ 4970391 (-) |
| ifng | ifngamma1 | coding | downstream | 422306 | 4756753 ~ 4778081 (-) |
| LOC118942988 | NA | coding | downstream | 471656 | 4723028 ~ 4728731 (-) |
| LOC110516460 | LOC106593189 | coding | downstream | 495864 | 4692883 ~ 4704523 (-) |
| LOC110518655 | LOC106592876 | coding | upstream | 757 | 5202814 ~ 5224336 (-) |
| LOC118942990 | NA | coding | upstream | 24012 | 5226069 ~ 5228087 (-) |
| LOC118942834 | LOC106576655 | coding | upstream | 34183 | 5236240 ~ 5313033 (-) |
| LOC118942837 | b2mg | coding | upstream | 218817 | 5420336 ~ 5426626 (-) |
| LOC110491894 | b2m | coding | upstream | 233219 | 5435276 ~ 5452253 (-) |
| G1703185 | NA | non-coding | downstream | 19314 | 5180674 ~ 5181073 (-) |
| G1703184 | NA | non-coding | downstream | 20475 | 5179227 ~ 5179912 (-) |
| G1703183 | NA | non-coding | downstream | 23384 | 5175237 ~ 5177003 (-) |
| G1703174 | NA | non-coding | downstream | 71410 | 5128437 ~ 5128977 (-) |
| G1703171 | NA | non-coding | downstream | 76777 | 5123059 ~ 5123610 (-) |
| G1703191 | NA | non-coding | upstream | 3961 | 5206018 ~ 5206870 (-) |
| G1703215 | NA | non-coding | upstream | 68288 | 5270345 ~ 5271041 (-) |
| G1703219 | NA | non-coding | upstream | 76971 | 5279028 ~ 5279429 (-) |
| G1703222 | NA | non-coding | upstream | 95271 | 5297328 ~ 5298348 (-) |
| G1703085 | NA | other | downstream | 252976 | 4946598 ~ 4947411 (-) |
| G1702914 | NA | other | downstream | 755468 | 4442249 ~ 4444919 (-) |
| LOC110499739 | grip1 | other | downstream | 1611800 | 3585864 ~ 4306764 (-) |
| G1702141 | NA | other | downstream | 1682010 | 3281102 ~ 3518377 (-) |
| G1703200 | NA | other | upstream | 30578 | 5232635 ~ 5235225 (-) |
| G1703323 | NA | other | upstream | 227411 | 5429468 ~ 5430889 (-) |
| LOC110491889 | b2m | other | upstream | 250891 | 5452948 ~ 5456355 (-) |
