G1703200


Basic Information

Item Value
gene id G1703200
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 5232635 ~ 5235225 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1949706
gaggacagggggtaagggagggaggggtgttgaggacagggggtaagggagggaggggtgttgaggacagggggtaagggagggagaggtgTTGAGAAGGTCTAGAAGTGCCTCTAAGATCCTACCAGCCCACCTACAAACACCTGGAATCACACCTCTACCTGCAAACACCTGGAATCACACCTCTACCTGCAAACACCTGGAATCACACCTCTACCTGCAAACACCTGGAATCACACCTCTACCTGCAAACATGACAAGACTTTTAGACAGAGACGACCTGCCTGagctcactgcacagcacagagacaacctgcctgagctcactgcacagcacagagaCGACCTGCCTGAGCTCACTCCACAGCACAGAGACGACCTGCCTGagctcactgcacagcacagagaCGACCTGCCTGagctcactgcacagcacagagaCGACCTGCCTGagctcactgcacagcacagggacgACCTGCCTGAGCTCACtgcacagacagcagagaacacactgcacagacagcagagaacaccgcggagacagcagagaacacagcacagacagcagagaacacagcacagacagcagagaacacagcacagacagcagagaacacactgcacagcacagacagcagagaacacagcacatacagcagagaacacagcacagacagcagagaacacactgcacagcacagacagcagagaacacactgcacagcacagacagcagagaacacactgcacagcacagacagcagagaacacactgcacagcacagacagcagagaacacactgcacagcacagacagcagagaacacactgcacagcacagacagcagagaacacagcacagacagcagagaacacactgcacagcacagacagcagagaacacagcacagacagcagagaacacagcacagacagcagagaacacactgcacagcacagacagcagagaacacagcacagacagcagagaacacagcacagacagcagagaacacagcacagacagcagagaacacactgcacagcacagacagcagagaacacagcacagacagcagagaacacagcacagacagcagagaacacagcacagacagcagagaacacagcac

Function

NR:

description
PREDICTED: interphotoreceptor matrix proteoglycan 2-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1949706 True 1136 TUCP 0.55 7 5232635 5235225

Neighbor

gene id symbol gene type direction distance location
LOC118942990 NA coding downstream 4548 5226069 ~ 5228087 (-)
LOC110518655 LOC106592876 coding downstream 8299 5202814 ~ 5224336 (-)
LOC118942989 NA coding downstream 172317 5052618 ~ 5060318 (-)
LOC118936570 mdm1 coding downstream 262244 4932214 ~ 4970391 (-)
ifng ifngamma1 coding downstream 454554 4756753 ~ 4778081 (-)
LOC118942834 LOC106576655 coding upstream 1015 5236240 ~ 5313033 (-)
LOC118942837 b2mg coding upstream 185649 5420336 ~ 5426626 (-)
LOC110491894 b2m coding upstream 200051 5435276 ~ 5452253 (-)
LOC118942838 NA coding upstream 208734 5443959 ~ 5449928 (-)
LOC110491889 b2m coding upstream 217745 5452948 ~ 5456355 (-)
G1703191 NA non-coding downstream 25765 5206018 ~ 5206870 (-)
G1703190 NA non-coding downstream 30578 5200387 ~ 5202057 (-)
G1703185 NA non-coding downstream 51562 5180674 ~ 5181073 (-)
G1703184 NA non-coding downstream 52723 5179227 ~ 5179912 (-)
G1703215 NA non-coding upstream 35120 5270345 ~ 5271041 (-)
G1703219 NA non-coding upstream 43803 5279028 ~ 5279429 (-)
G1703222 NA non-coding upstream 62103 5297328 ~ 5298348 (-)
G1703225 NA non-coding upstream 65380 5300605 ~ 5301853 (-)
G1703292 NA non-coding upstream 79239 5314464 ~ 5314770 (-)
G1703085 NA other downstream 285224 4946598 ~ 4947411 (-)
G1702914 NA other downstream 787716 4442249 ~ 4444919 (-)
LOC110499739 grip1 other downstream 1644048 3585864 ~ 4306764 (-)
G1703323 NA other upstream 194243 5429468 ~ 5430889 (-)
G1703658 NA other upstream 664117 5899342 ~ 5899781 (-)

Expression

G1703200 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 12.
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G1703200 Expression in each Bioproject

Bar chart with 20 bars.
G1703200 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 75.
End of interactive chart.

Co-expression Network