G1702862


Basic Information

Item Value
gene id G1702862
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 5270201 ~ 5270802 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1949146
taaatcaggccaggtagcctataggcctacttctatgtgtaaatcaggccaggtagcccataggcctacttctatgtgtaaatcaggccaggtagcccataggtctacttctatgtgtaaatcaggccaggtagcccataggtctacttctatgtgtaaatcaggccaggtagcccataggcctacttctatgtgtaaatcaggccaggtagcccataggcctacttctatgtgtaaatcaggccaggtagcccataggcctacttctatgtgtaaatcaggccaggtag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1949146 True 290 lncRNA 0.48 3 5270201 5270802

Neighbor

gene id symbol gene type direction distance location
LOC110516940 LOC106609861 coding upstream 70008 5182911 ~ 5200193 (+)
LOC118942832 LOC106576641 coding upstream 90262 5173660 ~ 5179939 (+)
LOC118942833 NA coding upstream 93517 5175495 ~ 5176684 (+)
LOC110490690 nu107 coding upstream 96772 5120120 ~ 5173429 (+)
LOC118936571 rap1b coding upstream 158266 4998226 ~ 5111935 (+)
LOC118942835 LOC106576675 coding downstream 69732 5340534 ~ 5350434 (+)
LOC118942836 LOC106576675 coding downstream 131406 5402208 ~ 5416558 (+)
LOC110491886 tmbim4 coding downstream 186737 5457539 ~ 5472994 (+)
LOC110511233 LOC107655547 coding downstream 292420 5563222 ~ 5598052 (+)
LOC118942839 NA coding downstream 322879 5593681 ~ 5595397 (+)
G1702860 NA non-coding upstream 1982 5267844 ~ 5268219 (+)
G1702859 NA non-coding upstream 10266 5259233 ~ 5259935 (+)
G1702847 NA non-coding upstream 28537 5240995 ~ 5241664 (+)
G1702833 NA non-coding upstream 51903 5217841 ~ 5218298 (+)
G1702825 NA non-coding upstream 67923 5202073 ~ 5202278 (+)
G1703242 NA non-coding downstream 53787 5324589 ~ 5324800 (+)
G1703246 NA non-coding downstream 58412 5329214 ~ 5329581 (+)
G1703247 NA non-coding downstream 59481 5330283 ~ 5330499 (+)
G1703251 NA non-coding downstream 65689 5336491 ~ 5336864 (+)
G1703252 NA non-coding downstream 66229 5337031 ~ 5337300 (+)
G1702856 NA other upstream 15316 5254165 ~ 5254885 (+)
G1702793 NA other upstream 215737 5052447 ~ 5054464 (+)
LOC110516816 LOC107655592 other upstream 869220 4384016 ~ 4441236 (+)
G1703391 NA other downstream 446397 5717199 ~ 5717701 (+)
G1703427 LOC106590880 other downstream 712543 5983345 ~ 5994810 (+)
mrps33 mrps33 other downstream 957312 6228081 ~ 6252333 (+)
G1703953 NA other downstream 1135230 6406032 ~ 6406773 (+)

Expression


Co-expression Network