G1703225


Basic Information

Item Value
gene id G1703225
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 5300605 ~ 5301853 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1949736
gttatagtcacagccgtgatttaaccagttttagaaacttcagagtgttttctatccacacatactaatcatatgcatatactatattcctggcatgagtagcaggacgctgaaaagttgtgcgatttttaacagaatgttcgaaaaaggagggggtagaagtaAGAGGTTTTAAGTAGTGTGTGTTTAGGCAGTATCTTTAAGTAGCGTGTTCAGGCAGTATTTTAAGTAGCGTGTTTAGGCAGTATCTTTAAGTAGTGTGTTCAGGCAGTATCTTTAAGTAGCGTGTTCAGGCAGTATCTTTAAGTAGCGTGTTCAGGCAGTATCTTTAAGTAGCGTGTTTAGGCAGTATCTTTAAGTAGTGTGTTCAGGCAGTATCTTTAAGTAGCGTGTTCAGGCAGTATTTTAAGTAGCGTGTTCAGGCAGTATTTTAAGTAGCGTGTTCAGGCAGTATCTTTAAGTAGCGTGTTTAGGCAGTATCTCTAAGTAGCGTGTTCAGGCAGTATCTTTAAGTAGCGTGTTTAGGCAGTATCTCTAAGTAGTGTGTTCAGGCAGTATCTTTAAGTAGCGTGTTTAGGCAGTATCTCTAAGTAGCGTGTTTAGGCAGTATCTTTAAGTAGCGTGTTTAGGCAGTATCTCTAAGTAGTGCGTTCAGGCAGTATCTTTAAGTAGCGTGTTTAGGCAGTATCTCTAAGTAGCGTGTTTAGGCAGTATCTTTAAGTAGCGTGTTTAGGCAGTATCTCTAAGTAGTGTGTTCAGGCAGTATCTTTAAGTAGCGTGTTTAGGCAGTATCTCTAAGTAGTGTGTTCAGGCAGTATCTTTAAGTAGCGTGTTTAGGCAGTATCTCTAAGTAGTGTGTTCAGGCAGTATCTTTAAGTAGCGTGTTTAGGCAGTATCTCTAAGTAGCGTGTTTAGGCAGTATCTTTAAGTAGCGTGTTTAGGCAGTATCTCTAAGTAGTGTGTTCAGGCAGTATCTCTAAGTAGCGTGTTTAGGCAGTATCTCTAAGTAGCGTGTTTAGGCAGTATCTTTAAGTAGCGTGTTTAGGCAGTATCTCTAAGTAGTGTGTTCAGGCAGTATCTATcagcgttttaactactttgcagatgtGAAACAGACATAATATCAAATACCCACTTCATACTACAAAACCAACTTCATAAacagtttaaaat

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1949736 True 1173 lncRNA 0.39 2 5300605 5301853

Neighbor

gene id symbol gene type direction distance location
LOC118942990 NA coding downstream 72518 5226069 ~ 5228087 (-)
LOC110518655 LOC106592876 coding downstream 76269 5202814 ~ 5224336 (-)
LOC118942989 NA coding downstream 240287 5052618 ~ 5060318 (-)
LOC118936570 mdm1 coding downstream 330214 4932214 ~ 4970391 (-)
ifng ifngamma1 coding downstream 522524 4756753 ~ 4778081 (-)
LOC118942837 b2mg coding upstream 119021 5420336 ~ 5426626 (-)
LOC110491894 b2m coding upstream 133423 5435276 ~ 5452253 (-)
LOC118942838 NA coding upstream 142106 5443959 ~ 5449928 (-)
LOC110491889 b2m coding upstream 151117 5452948 ~ 5456355 (-)
vhll NA coding upstream 176592 5478445 ~ 5480899 (-)
G1703222 NA non-coding downstream 2257 5297328 ~ 5298348 (-)
G1703219 NA non-coding downstream 21176 5279028 ~ 5279429 (-)
G1703215 NA non-coding downstream 29564 5270345 ~ 5271041 (-)
G1703191 NA non-coding downstream 93735 5206018 ~ 5206870 (-)
G1703292 NA non-coding upstream 12611 5314464 ~ 5314770 (-)
G1703294 NA non-coding upstream 14280 5316133 ~ 5317213 (-)
G1703302 NA non-coding upstream 21738 5323591 ~ 5323837 (-)
G1703305 NA non-coding upstream 27396 5329249 ~ 5329565 (-)
G1703306 NA non-coding upstream 33509 5335362 ~ 5335759 (-)
G1703200 NA other downstream 65380 5232635 ~ 5235225 (-)
G1703190 NA other downstream 98548 5200387 ~ 5202057 (-)
G1703085 NA other downstream 353194 4946598 ~ 4947411 (-)
G1702914 NA other downstream 855686 4442249 ~ 4444919 (-)
G1703323 NA other upstream 127615 5429468 ~ 5430889 (-)
G1703658 NA other upstream 597489 5899342 ~ 5899781 (-)
LOC118942843 NA other upstream 648181 5950034 ~ 5963423 (-)

Expression


Co-expression Network