Gene
RNA
| Item | Value |
|---|---|
| gene id | G1703313 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 5360596 ~ 5361220 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: putative proline-rich protein 21 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1949848 | True | 625 | lncRNA | 0.38 | 1 | 5360596 | 5361220 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118942834 | LOC106576655 | coding | downstream | 47563 | 5236240 ~ 5313033 (-) |
| LOC118942990 | NA | coding | downstream | 132509 | 5226069 ~ 5228087 (-) |
| LOC110518655 | LOC106592876 | coding | downstream | 136260 | 5202814 ~ 5224336 (-) |
| LOC118942989 | NA | coding | downstream | 300278 | 5052618 ~ 5060318 (-) |
| LOC118936570 | mdm1 | coding | downstream | 390205 | 4932214 ~ 4970391 (-) |
| LOC118942837 | b2mg | coding | upstream | 59654 | 5420336 ~ 5426626 (-) |
| LOC110491894 | b2m | coding | upstream | 74056 | 5435276 ~ 5452253 (-) |
| LOC118942838 | NA | coding | upstream | 82739 | 5443959 ~ 5449928 (-) |
| LOC110491889 | b2m | coding | upstream | 91750 | 5452948 ~ 5456355 (-) |
| vhll | NA | coding | upstream | 117225 | 5478445 ~ 5480899 (-) |
| G1703312 | NA | non-coding | downstream | 78 | 5360296 ~ 5360518 (-) |
| G1703298 | b2mg | non-coding | downstream | 1678 | 5351270 ~ 5358918 (-) |
| G1703307 | NA | non-coding | downstream | 24316 | 5336006 ~ 5336280 (-) |
| G1703306 | NA | non-coding | downstream | 24837 | 5335362 ~ 5335759 (-) |
| G1703305 | NA | non-coding | downstream | 31031 | 5329249 ~ 5329565 (-) |
| G1703314 | NA | non-coding | upstream | 541 | 5361761 ~ 5448487 (-) |
| G1703315 | NA | non-coding | upstream | 1200 | 5362420 ~ 5448780 (-) |
| G1703316 | NA | non-coding | upstream | 7874 | 5369094 ~ 5369544 (-) |
| G1703323 | NA | non-coding | upstream | 68248 | 5429468 ~ 5430889 (-) |
| G1703330 | NA | non-coding | upstream | 105349 | 5466569 ~ 5467856 (-) |
| G1703200 | NA | other | downstream | 125371 | 5232635 ~ 5235225 (-) |
| G1703190 | NA | other | downstream | 158539 | 5200387 ~ 5202057 (-) |
| G1703658 | NA | other | upstream | 538122 | 5899342 ~ 5899781 (-) |
| LOC118942843 | NA | other | upstream | 588814 | 5950034 ~ 5963423 (-) |
