G1703290


Basic Information

Item Value
gene id G1703290
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 5486377 ~ 5486680 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1949822
ctacagctctggtctctacagctccatccactacagctccatcccctacagctccatcctctacagctccatccactacagctccatcctctacagctccatcctctacagctccatcctctacagctccatcctctacagctctggtctctacagctccatcctctacagctccatcctctacagctccatcctctacagctctggtCTCTACAACTCCAtactctacagctccatcctctac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1949822 True 244 lncRNA 0.53 2 5486377 5486680

Neighbor

gene id symbol gene type direction distance location
LOC110491886 tmbim4 coding upstream 13383 5457539 ~ 5472994 (+)
LOC118942836 LOC106576675 coding upstream 69819 5402208 ~ 5416558 (+)
LOC118942835 LOC106576675 coding upstream 135943 5340534 ~ 5350434 (+)
LOC110516940 LOC106609861 coding upstream 286184 5182911 ~ 5200193 (+)
LOC118942833 NA coding upstream 309693 5175495 ~ 5176684 (+)
LOC110511233 LOC107655547 coding downstream 76542 5563222 ~ 5598052 (+)
LOC118942839 NA coding downstream 107001 5593681 ~ 5595397 (+)
LOC110519381 LOC106576618 coding downstream 125206 5611886 ~ 5657179 (+)
LOC118936346 dera coding downstream 378610 5865290 ~ 5879297 (+)
LOC118942842 LOC106575061 coding downstream 492671 5979351 ~ 5986641 (+)
G1703286 NA non-coding upstream 6872 5479116 ~ 5479505 (+)
G1703282 NA non-coding upstream 7970 5477192 ~ 5478407 (+)
G1703281 NA non-coding upstream 25632 5460258 ~ 5460745 (+)
G1703273 NA non-coding upstream 42587 5442491 ~ 5443790 (+)
G1703270 NA non-coding upstream 46185 5439896 ~ 5440192 (+)
G1703291 NA non-coding downstream 6613 5493293 ~ 5494453 (+)
G1703337 NA non-coding downstream 12430 5499110 ~ 5501117 (+)
G1703338 NA non-coding downstream 15019 5501699 ~ 5502341 (+)
G1703353 NA non-coding downstream 67563 5554243 ~ 5601693 (+)
G1703369 NA non-coding downstream 101950 5588630 ~ 5588927 (+)
G1702856 NA other upstream 231492 5254165 ~ 5254885 (+)
G1702793 NA other upstream 431913 5052447 ~ 5054464 (+)
LOC110516816 LOC107655592 other upstream 1085396 4384016 ~ 4441236 (+)
G1703391 NA other downstream 230519 5717199 ~ 5717701 (+)
G1703427 LOC106590880 other downstream 496665 5983345 ~ 5994810 (+)
mrps33 mrps33 other downstream 741434 6228081 ~ 6252333 (+)
G1703953 NA other downstream 919352 6406032 ~ 6406773 (+)

Expression


Co-expression Network