G1703291


Basic Information

Item Value
gene id G1703291
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 5493293 ~ 5494453 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1949823
caacaaaaaaaaatgtatttaatctgaatgtaaaaaataaacGGATTACATCATATTTATCTGGGAAACTTTAAAGATTTGAATAGGATTTACACCGGAGATCAAGTCAGGGGGTAGAGATTACAGTTTCAACTGAAGACAGTAGAGATTCTtctatatattaatacatttataGTTGAGGTTTGTATTTCTTATTGCTTTCTTTGGCTTTCTTTCTTTCAGGAAGAGTGTTGCTGGTATGGTGATatagtgttgctggtatggtgatatagtgttgctggtatggtgatatagtgttgctgGTATGGTGATATAGTGTTGCTGGGCTGGTATGGTGATATAGTGTTGCTGgtatggtgacatagtgttgctggtatggtgacatagtgttgctgGTATGGTGATATAGTGTTTGTTGCTGGGCGGGTATGGTGATATAGTGTTGCTGGTATGGTGATATAGTGTTGCTGgtatggtgacatagtgttgctgGTATGGTGATATAGTGTTGCTGGTTTGGTGACAAAGTGTTGCTGGTATGGTGATATAGTGTTGCTGgtatgg

Function

NR:

description
Hemagglutinin/amebocyte aggregation factor

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1949823 True 564 lncRNA 0.38 3 5493293 5494453

Neighbor

gene id symbol gene type direction distance location
LOC110491886 tmbim4 coding upstream 20299 5457539 ~ 5472994 (+)
LOC118942836 LOC106576675 coding upstream 76735 5402208 ~ 5416558 (+)
LOC118942835 LOC106576675 coding upstream 142859 5340534 ~ 5350434 (+)
LOC110516940 LOC106609861 coding upstream 293100 5182911 ~ 5200193 (+)
LOC118942833 NA coding upstream 316609 5175495 ~ 5176684 (+)
LOC110511233 LOC107655547 coding downstream 68769 5563222 ~ 5598052 (+)
LOC118942839 NA coding downstream 99228 5593681 ~ 5595397 (+)
LOC110519381 LOC106576618 coding downstream 117433 5611886 ~ 5657179 (+)
LOC118936346 dera coding downstream 370837 5865290 ~ 5879297 (+)
LOC118942842 LOC106575061 coding downstream 484898 5979351 ~ 5986641 (+)
G1703230 LOC106592946 non-coding upstream 9 5424487 ~ 5493284 (+)
G1703290 NA non-coding upstream 6613 5486377 ~ 5486680 (+)
G1703286 NA non-coding upstream 13788 5479116 ~ 5479505 (+)
G1703282 NA non-coding upstream 14886 5477192 ~ 5478407 (+)
G1703281 NA non-coding upstream 32548 5460258 ~ 5460745 (+)
G1703337 NA non-coding downstream 4657 5499110 ~ 5501117 (+)
G1703338 NA non-coding downstream 7246 5501699 ~ 5502341 (+)
G1703353 NA non-coding downstream 59790 5554243 ~ 5601693 (+)
G1703369 NA non-coding downstream 94177 5588630 ~ 5588927 (+)
G1703379 NA non-coding downstream 147783 5642236 ~ 5642693 (+)
G1702856 NA other upstream 238408 5254165 ~ 5254885 (+)
G1702793 NA other upstream 438829 5052447 ~ 5054464 (+)
LOC110516816 LOC107655592 other upstream 1092312 4384016 ~ 4441236 (+)
G1703391 NA other downstream 222746 5717199 ~ 5717701 (+)
G1703427 LOC106590880 other downstream 488892 5983345 ~ 5994810 (+)
mrps33 mrps33 other downstream 733661 6228081 ~ 6252333 (+)
G1703953 NA other downstream 911579 6406032 ~ 6406773 (+)

Expression


Co-expression Network