Gene
RNA
| Item | Value |
|---|---|
| gene id | G1703338 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 5501699 ~ 5502341 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1949881 | False | 305 | lncRNA | 0.43 | 2 | 5501699 | 5502341 |
| TU1949880 | True | 269 | lncRNA | 0.43 | 2 | 5501967 | 5502341 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110491886 | tmbim4 | coding | upstream | 28705 | 5457539 ~ 5472994 (+) |
| LOC118942836 | LOC106576675 | coding | upstream | 85141 | 5402208 ~ 5416558 (+) |
| LOC118942835 | LOC106576675 | coding | upstream | 151265 | 5340534 ~ 5350434 (+) |
| LOC110516940 | LOC106609861 | coding | upstream | 301506 | 5182911 ~ 5200193 (+) |
| LOC118942833 | NA | coding | upstream | 325015 | 5175495 ~ 5176684 (+) |
| LOC110511233 | LOC107655547 | coding | downstream | 60881 | 5563222 ~ 5598052 (+) |
| LOC118942839 | NA | coding | downstream | 91340 | 5593681 ~ 5595397 (+) |
| LOC110519381 | LOC106576618 | coding | downstream | 109545 | 5611886 ~ 5657179 (+) |
| LOC118936346 | dera | coding | downstream | 362949 | 5865290 ~ 5879297 (+) |
| LOC118942842 | LOC106575061 | coding | downstream | 477010 | 5979351 ~ 5986641 (+) |
| G1703337 | NA | non-coding | upstream | 582 | 5499110 ~ 5501117 (+) |
| G1703291 | NA | non-coding | upstream | 7246 | 5493293 ~ 5494453 (+) |
| G1703290 | NA | non-coding | upstream | 15019 | 5486377 ~ 5486680 (+) |
| G1703286 | NA | non-coding | upstream | 22194 | 5479116 ~ 5479505 (+) |
| G1703282 | NA | non-coding | upstream | 23292 | 5477192 ~ 5478407 (+) |
| G1703353 | NA | non-coding | downstream | 51902 | 5554243 ~ 5601693 (+) |
| G1703369 | NA | non-coding | downstream | 86289 | 5588630 ~ 5588927 (+) |
| G1703379 | NA | non-coding | downstream | 139895 | 5642236 ~ 5642693 (+) |
| G1703381 | NA | non-coding | downstream | 140656 | 5642997 ~ 5644121 (+) |
| G1702856 | NA | other | upstream | 246814 | 5254165 ~ 5254885 (+) |
| G1702793 | NA | other | upstream | 447235 | 5052447 ~ 5054464 (+) |
| LOC110516816 | LOC107655592 | other | upstream | 1100718 | 4384016 ~ 4441236 (+) |
| G1703391 | NA | other | downstream | 214858 | 5717199 ~ 5717701 (+) |
| G1703427 | LOC106590880 | other | downstream | 481004 | 5983345 ~ 5994810 (+) |
| mrps33 | mrps33 | other | downstream | 725773 | 6228081 ~ 6252333 (+) |
| G1703953 | NA | other | downstream | 903691 | 6406032 ~ 6406773 (+) |
