Gene
RNA
| Item | Value |
|---|---|
| gene id | G1703353 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 5554243 ~ 5601693 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1949917 | True | 498 | lncRNA | 0.39 | 3 | 5554243 | 5601693 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110491886 | tmbim4 | coding | upstream | 81249 | 5457539 ~ 5472994 (+) |
| LOC118942836 | LOC106576675 | coding | upstream | 137685 | 5402208 ~ 5416558 (+) |
| LOC118942835 | LOC106576675 | coding | upstream | 203809 | 5340534 ~ 5350434 (+) |
| LOC110516940 | LOC106609861 | coding | upstream | 354050 | 5182911 ~ 5200193 (+) |
| LOC118942833 | NA | coding | upstream | 377559 | 5175495 ~ 5176684 (+) |
| LOC110519381 | LOC106576618 | coding | downstream | 10193 | 5611886 ~ 5657179 (+) |
| LOC118936346 | dera | coding | downstream | 263597 | 5865290 ~ 5879297 (+) |
| LOC118942842 | LOC106575061 | coding | downstream | 377658 | 5979351 ~ 5986641 (+) |
| LOC110527635 | LOC106590880 | coding | downstream | 385082 | 5986775 ~ 5993790 (+) |
| mrps33 | mrps33 | coding | downstream | 626388 | 6228081 ~ 6252333 (+) |
| G1703338 | NA | non-coding | upstream | 51902 | 5501699 ~ 5502341 (+) |
| G1703337 | NA | non-coding | upstream | 53126 | 5499110 ~ 5501117 (+) |
| G1703291 | NA | non-coding | upstream | 59790 | 5493293 ~ 5494453 (+) |
| G1703290 | NA | non-coding | upstream | 67563 | 5486377 ~ 5486680 (+) |
| G1703286 | NA | non-coding | upstream | 74738 | 5479116 ~ 5479505 (+) |
| G1703379 | NA | non-coding | downstream | 40543 | 5642236 ~ 5642693 (+) |
| G1703381 | NA | non-coding | downstream | 41304 | 5642997 ~ 5644121 (+) |
| G1703388 | NA | non-coding | downstream | 74050 | 5675743 ~ 5678147 (+) |
| G1703389 | NA | non-coding | downstream | 78373 | 5680066 ~ 5719953 (+) |
| G1702856 | NA | other | upstream | 299358 | 5254165 ~ 5254885 (+) |
| G1702793 | NA | other | upstream | 499779 | 5052447 ~ 5054464 (+) |
| LOC110516816 | LOC107655592 | other | upstream | 1153262 | 4384016 ~ 4441236 (+) |
| G1703391 | NA | other | downstream | 115506 | 5717199 ~ 5717701 (+) |
| G1703427 | LOC106590880 | other | downstream | 381652 | 5983345 ~ 5994810 (+) |
| G1703953 | NA | other | downstream | 804339 | 6406032 ~ 6406773 (+) |
| LOC118942844 | large1 | other | downstream | 1201526 | 6712920 ~ 6879730 (+) |
