G1703369


Basic Information

Item Value
gene id G1703369
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 5588630 ~ 5588927 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1949943
TCGTAATCGGCGTAGGATAAGTTTTGATCTGATCTGTAAGCCTACACCGAttctgagcaatctttcaaaTGATTTGTGACATTTGAATCTGCTTTCCAGCGGTGAATTTGATCTGTGTCAGCAGCGTTTACGACGACAAGCCTCTCTCTCTTATGAGCGGAGTGGAGTGAGTTAAGGAACAGCTGAACGTCTGCATCTCAGAAGTGGGTTTCACAGACCGACTTTGTATGTCCGAACTACGATCGCCTTCCCCCGAAAAATAACAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1949943 True 267 lncRNA 0.45 2 5588630 5588927

Neighbor

gene id symbol gene type direction distance location
LOC110491886 tmbim4 coding upstream 115636 5457539 ~ 5472994 (+)
LOC118942836 LOC106576675 coding upstream 172072 5402208 ~ 5416558 (+)
LOC118942835 LOC106576675 coding upstream 238196 5340534 ~ 5350434 (+)
LOC110516940 LOC106609861 coding upstream 388437 5182911 ~ 5200193 (+)
LOC118942833 NA coding upstream 411946 5175495 ~ 5176684 (+)
LOC118942839 NA coding downstream 4754 5593681 ~ 5595397 (+)
LOC110519381 LOC106576618 coding downstream 22959 5611886 ~ 5657179 (+)
LOC118936346 dera coding downstream 276363 5865290 ~ 5879297 (+)
LOC118942842 LOC106575061 coding downstream 390424 5979351 ~ 5986641 (+)
LOC110527635 LOC106590880 coding downstream 397848 5986775 ~ 5993790 (+)
G1703338 NA non-coding upstream 86289 5501699 ~ 5502341 (+)
G1703337 NA non-coding upstream 87513 5499110 ~ 5501117 (+)
G1703291 NA non-coding upstream 94177 5493293 ~ 5494453 (+)
G1703290 NA non-coding upstream 101950 5486377 ~ 5486680 (+)
G1703286 NA non-coding upstream 109125 5479116 ~ 5479505 (+)
G1703379 NA non-coding downstream 53309 5642236 ~ 5642693 (+)
G1703381 NA non-coding downstream 54070 5642997 ~ 5644121 (+)
G1703388 NA non-coding downstream 86816 5675743 ~ 5678147 (+)
G1703389 NA non-coding downstream 91139 5680066 ~ 5719953 (+)
G1702856 NA other upstream 333745 5254165 ~ 5254885 (+)
G1702793 NA other upstream 534166 5052447 ~ 5054464 (+)
LOC110516816 LOC107655592 other upstream 1187649 4384016 ~ 4441236 (+)
G1703391 NA other downstream 128272 5717199 ~ 5717701 (+)
G1703427 LOC106590880 other downstream 394418 5983345 ~ 5994810 (+)
mrps33 mrps33 other downstream 639187 6228081 ~ 6252333 (+)
G1703953 NA other downstream 817105 6406032 ~ 6406773 (+)
LOC118942844 large1 other downstream 1214292 6712920 ~ 6879730 (+)

Expression


Co-expression Network