Item | Value |
---|---|
gene id | G1703379 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048585.1 |
NCBI id | CM023239.2 |
chromosome length | 64935962 |
location | 5642236 ~ 5642693 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
id | description |
---|
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU1949955 | True | 277 | lncRNA | 0.46 | 3 | 5642236 | 5642693 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110511233 | LOC107655547 | coding | upstream | 44184 | 5563222 ~ 5598052 (+) |
LOC118942839 | NA | coding | upstream | 46839 | 5593681 ~ 5595397 (+) |
LOC110491886 | tmbim4 | coding | upstream | 169242 | 5457539 ~ 5472994 (+) |
LOC118942836 | LOC106576675 | coding | upstream | 225678 | 5402208 ~ 5416558 (+) |
LOC118942835 | LOC106576675 | coding | upstream | 291802 | 5340534 ~ 5350434 (+) |
LOC118936346 | dera | coding | downstream | 222597 | 5865290 ~ 5879297 (+) |
LOC118942842 | LOC106575061 | coding | downstream | 336658 | 5979351 ~ 5986641 (+) |
LOC110527635 | LOC106590880 | coding | downstream | 344082 | 5986775 ~ 5993790 (+) |
mrps33 | mrps33 | coding | downstream | 585388 | 6228081 ~ 6252333 (+) |
LOC110500907 | braf | coding | downstream | 617120 | 6259813 ~ 6304321 (+) |
G1703353 | NA | non-coding | upstream | 40543 | 5554243 ~ 5601693 (+) |
G1703369 | NA | non-coding | upstream | 53309 | 5588630 ~ 5588927 (+) |
G1703338 | NA | non-coding | upstream | 139895 | 5501699 ~ 5502341 (+) |
G1703337 | NA | non-coding | upstream | 141119 | 5499110 ~ 5501117 (+) |
G1703291 | NA | non-coding | upstream | 147783 | 5493293 ~ 5494453 (+) |
G1703381 | NA | non-coding | downstream | 304 | 5642997 ~ 5644121 (+) |
LOC110519381 | LOC106576618 | non-coding | downstream | 13494 | 5611886 ~ 5657179 (+) |
G1703388 | NA | non-coding | downstream | 33050 | 5675743 ~ 5678147 (+) |
G1703389 | NA | non-coding | downstream | 37373 | 5680066 ~ 5719953 (+) |
G1703401 | NA | non-coding | downstream | 69940 | 5712633 ~ 5714065 (+) |
G1702856 | NA | other | upstream | 387351 | 5254165 ~ 5254885 (+) |
LOC110516940 | LOC106609861 | other | upstream | 453389 | 5182911 ~ 5200193 (+) |
G1702793 | NA | other | upstream | 587772 | 5052447 ~ 5054464 (+) |
LOC110516816 | LOC107655592 | other | upstream | 1241255 | 4384016 ~ 4441236 (+) |
G1703391 | NA | other | downstream | 74506 | 5717199 ~ 5717701 (+) |
G1703427 | LOC106590880 | other | downstream | 340652 | 5983345 ~ 5994810 (+) |
G1703953 | NA | other | downstream | 763339 | 6406032 ~ 6406773 (+) |
LOC118942844 | large1 | other | downstream | 1160526 | 6712920 ~ 6879730 (+) |