G1703381


Basic Information

Item Value
gene id G1703381
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 5642997 ~ 5644121 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1949957
cacagtgggaggagcttcattctctagctacaacactgagaatctcactgccgataggtcgttatcacagtgggaggagcttcattctctagctacaacactgagaatctcactgccgataggtcgttatcacagtgggaggagcttcattctctagctacaacactgagaatctcactgccgataggttgttatcacagtgggaggagcttcattctctagctacaacactgagaatctcactgccgataggtcgttatcacagtgggaggaccttcattctctagctacaacactgagaatctcactgccgataggtcgttatcacagtgggaggagcttcattctctagctaGAACACTtagaatctcactgccgataggtcgttatcacagtgggaggaccttcattctctagctacaacactgagaatctcactgccgataggtcgttatcacagtgggaggagcttcat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1949957 True 475 lncRNA 0.48 3 5642997 5644121

Neighbor

gene id symbol gene type direction distance location
LOC110511233 LOC107655547 coding upstream 44945 5563222 ~ 5598052 (+)
LOC118942839 NA coding upstream 47600 5593681 ~ 5595397 (+)
LOC110491886 tmbim4 coding upstream 170003 5457539 ~ 5472994 (+)
LOC118942836 LOC106576675 coding upstream 226439 5402208 ~ 5416558 (+)
LOC118942835 LOC106576675 coding upstream 292563 5340534 ~ 5350434 (+)
LOC118936346 dera coding downstream 221169 5865290 ~ 5879297 (+)
LOC118942842 LOC106575061 coding downstream 335230 5979351 ~ 5986641 (+)
LOC110527635 LOC106590880 coding downstream 342654 5986775 ~ 5993790 (+)
mrps33 mrps33 coding downstream 583960 6228081 ~ 6252333 (+)
LOC110500907 braf coding downstream 615692 6259813 ~ 6304321 (+)
G1703379 NA non-coding upstream 304 5642236 ~ 5642693 (+)
G1703353 NA non-coding upstream 41304 5554243 ~ 5601693 (+)
G1703369 NA non-coding upstream 54070 5588630 ~ 5588927 (+)
G1703338 NA non-coding upstream 140656 5501699 ~ 5502341 (+)
G1703337 NA non-coding upstream 141880 5499110 ~ 5501117 (+)
LOC110519381 LOC106576618 non-coding downstream 12066 5611886 ~ 5657179 (+)
G1703388 NA non-coding downstream 31622 5675743 ~ 5678147 (+)
G1703389 NA non-coding downstream 35945 5680066 ~ 5719953 (+)
G1703401 NA non-coding downstream 68512 5712633 ~ 5714065 (+)
G1703386 NA non-coding downstream 91703 5735824 ~ 5740334 (+)
G1702856 NA other upstream 388112 5254165 ~ 5254885 (+)
LOC110516940 LOC106609861 other upstream 454150 5182911 ~ 5200193 (+)
G1702793 NA other upstream 588533 5052447 ~ 5054464 (+)
G1702554 NA other upstream 1247482 4394993 ~ 4395515 (+)
G1703391 NA other downstream 73078 5717199 ~ 5717701 (+)
G1703427 LOC106590880 other downstream 339224 5983345 ~ 5994810 (+)
G1703953 NA other downstream 761911 6406032 ~ 6406773 (+)
LOC118942844 large1 other downstream 1159098 6712920 ~ 6879730 (+)

Expression


Co-expression Network