Gene
RNA
| Item | Value |
|---|---|
| gene id | G1703401 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 5712633 ~ 5714065 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1950000 | True | 882 | lncRNA | 0.33 | 3 | 5712633 | 5714065 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110519381 | LOC106576618 | coding | upstream | 56046 | 5611886 ~ 5657179 (+) |
| LOC110511233 | LOC107655547 | coding | upstream | 114581 | 5563222 ~ 5598052 (+) |
| LOC118942839 | NA | coding | upstream | 117236 | 5593681 ~ 5595397 (+) |
| LOC110491886 | tmbim4 | coding | upstream | 239639 | 5457539 ~ 5472994 (+) |
| LOC118942836 | LOC106576675 | coding | upstream | 296075 | 5402208 ~ 5416558 (+) |
| LOC118936346 | dera | coding | downstream | 151225 | 5865290 ~ 5879297 (+) |
| LOC118942842 | LOC106575061 | coding | downstream | 265286 | 5979351 ~ 5986641 (+) |
| LOC110527635 | LOC106590880 | coding | downstream | 272710 | 5986775 ~ 5993790 (+) |
| mrps33 | mrps33 | coding | downstream | 514016 | 6228081 ~ 6252333 (+) |
| LOC110500907 | braf | coding | downstream | 545748 | 6259813 ~ 6304321 (+) |
| G1703388 | NA | non-coding | upstream | 34486 | 5675743 ~ 5678147 (+) |
| G1703381 | NA | non-coding | upstream | 68512 | 5642997 ~ 5644121 (+) |
| G1703379 | NA | non-coding | upstream | 69940 | 5642236 ~ 5642693 (+) |
| G1703369 | NA | non-coding | upstream | 123706 | 5588630 ~ 5588927 (+) |
| G1703386 | NA | non-coding | downstream | 21759 | 5735824 ~ 5740334 (+) |
| G1703420 | NA | non-coding | downstream | 91121 | 5805186 ~ 5805425 (+) |
| G1703437 | NA | non-coding | downstream | 128201 | 5842266 ~ 5842914 (+) |
| G1703438 | NA | non-coding | downstream | 130708 | 5844773 ~ 5845046 (+) |
| G1703441 | NA | non-coding | downstream | 138118 | 5852183 ~ 5852416 (+) |
| G1702856 | NA | other | upstream | 457748 | 5254165 ~ 5254885 (+) |
| LOC110516940 | LOC106609861 | other | upstream | 523786 | 5182911 ~ 5200193 (+) |
| G1702793 | NA | other | upstream | 658169 | 5052447 ~ 5054464 (+) |
| G1702554 | NA | other | upstream | 1317118 | 4394993 ~ 4395515 (+) |
| G1703391 | NA | other | downstream | 3134 | 5717199 ~ 5717701 (+) |
| G1703427 | LOC106590880 | other | downstream | 269280 | 5983345 ~ 5994810 (+) |
| G1703953 | NA | other | downstream | 691967 | 6406032 ~ 6406773 (+) |
| LOC118942844 | large1 | other | downstream | 1089154 | 6712920 ~ 6879730 (+) |
