Gene
RNA
| Item | Value |
|---|---|
| gene id | G1703614 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 5725608 ~ 5728468 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Ribosomal RNA processing protein 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1950356 | True | 395 | lncRNA | 0.43 | 3 | 5725608 | 5728468 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118942840 | NA | coding | downstream | 39392 | 5652498 ~ 5686229 (-) |
| LOC110511232 | wif1 | coding | downstream | 164185 | 5496219 ~ 5561423 (-) |
| vhll | NA | coding | downstream | 244709 | 5478445 ~ 5480899 (-) |
| LOC110491889 | b2m | coding | downstream | 269253 | 5452948 ~ 5456355 (-) |
| LOC118942838 | NA | coding | downstream | 275680 | 5443959 ~ 5449928 (-) |
| LOC118942843 | NA | coding | upstream | 222402 | 5950034 ~ 5963423 (-) |
| LOC110499738 | lmo3 | coding | upstream | 338667 | 6067135 ~ 6188810 (-) |
| LOC118942797 | NA | coding | upstream | 789420 | 6517888 ~ 6518853 (-) |
| LOC118942845 | LOC106590959 | coding | upstream | 1162055 | 6890523 ~ 6917536 (-) |
| LOC118942846 | LOC105029310 | coding | upstream | 1320428 | 7048896 ~ 7050907 (-) |
| G1703588 | NA | non-coding | downstream | 10748 | 5655963 ~ 5714860 (-) |
| G1703605 | NA | non-coding | downstream | 15564 | 5693001 ~ 5710044 (-) |
| G1703600 | NA | non-coding | downstream | 50246 | 5674649 ~ 5675362 (-) |
| G1703592 | NA | non-coding | downstream | 78794 | 5646277 ~ 5646814 (-) |
| G1703619 | NA | non-coding | upstream | 21522 | 5749990 ~ 5751282 (-) |
| G1703638 | NA | non-coding | upstream | 110532 | 5839000 ~ 5839232 (-) |
| G1703639 | NA | non-coding | upstream | 111389 | 5839857 ~ 5840065 (-) |
| G1703642 | NA | non-coding | upstream | 115713 | 5844181 ~ 5844536 (-) |
| G1703644 | NA | non-coding | upstream | 120024 | 5848492 ~ 5848734 (-) |
| G1703323 | NA | other | downstream | 295436 | 5429468 ~ 5430889 (-) |
| LOC118942837 | b2mg | other | downstream | 299016 | 5420336 ~ 5426626 (-) |
| LOC118942834 | LOC106576655 | other | downstream | 412635 | 5236240 ~ 5313033 (-) |
| G1703200 | NA | other | downstream | 490383 | 5232635 ~ 5235225 (-) |
| G1703658 | NA | other | upstream | 170874 | 5899342 ~ 5899781 (-) |
| G1703669 | NA | other | upstream | 263230 | 5984365 ~ 5996426 (-) |
| G1703878 | NA | other | upstream | 577085 | 6305553 ~ 6308220 (-) |
| G1703896 | NA | other | upstream | 614273 | 6342741 ~ 6343182 (-) |
