G1703445


Basic Information

Item Value
gene id G1703445
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 5862584 ~ 5862837 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1950071
acagttagaaacagaatcagacccagacagttagaaacagaaccagacagttagaaacagaatcagacccagacagttagaaacagaaccagacagttagaaacagaatcagacccagacagttagaaacagaaccagacagttagaaacagaatcagacccagacagttagaaacagaatcagaaccagacagttagaaacagaaccagacccagacagttagaaacagaatcagaaccagacagttataaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1950071 True 254 lncRNA 0.41 1 5862584 5862837

Neighbor

gene id symbol gene type direction distance location
LOC110519381 LOC106576618 coding upstream 205997 5611886 ~ 5657179 (+)
LOC110511233 LOC107655547 coding upstream 264532 5563222 ~ 5598052 (+)
LOC118942839 NA coding upstream 267187 5593681 ~ 5595397 (+)
LOC110491886 tmbim4 coding upstream 389590 5457539 ~ 5472994 (+)
LOC118942836 LOC106576675 coding upstream 446026 5402208 ~ 5416558 (+)
LOC118936346 dera coding downstream 2453 5865290 ~ 5879297 (+)
LOC118942842 LOC106575061 coding downstream 116514 5979351 ~ 5986641 (+)
LOC110527635 LOC106590880 coding downstream 123938 5986775 ~ 5993790 (+)
mrps33 mrps33 coding downstream 365244 6228081 ~ 6252333 (+)
LOC110500907 braf coding downstream 396976 6259813 ~ 6304321 (+)
G1703444 NA non-coding upstream 1215 5861153 ~ 5861369 (+)
G1703443 NA non-coding upstream 5099 5857158 ~ 5857485 (+)
G1703441 NA non-coding upstream 10168 5852183 ~ 5852416 (+)
G1703438 NA non-coding upstream 17538 5844773 ~ 5845046 (+)
G1703437 NA non-coding upstream 19670 5842266 ~ 5842914 (+)
G1703429 NA non-coding downstream 18034 5880871 ~ 5881532 (+)
G1703449 NA non-coding downstream 25707 5888544 ~ 5888806 (+)
G1703451 NA non-coding downstream 34376 5897213 ~ 5897529 (+)
G1703456 NA non-coding downstream 47118 5909955 ~ 5910256 (+)
G1703391 NA other upstream 144883 5717199 ~ 5717701 (+)
G1702856 NA other upstream 607699 5254165 ~ 5254885 (+)
LOC110516940 LOC106609861 other upstream 673737 5182911 ~ 5200193 (+)
G1702793 NA other upstream 808120 5052447 ~ 5054464 (+)
G1703427 LOC106590880 other downstream 120508 5983345 ~ 5994810 (+)
G1703953 NA other downstream 543195 6406032 ~ 6406773 (+)
LOC118942844 large1 other downstream 940382 6712920 ~ 6879730 (+)
G1704232 NA other downstream 1144332 7007169 ~ 7007740 (+)

Expression


Co-expression Network