G1703456


Basic Information

Item Value
gene id G1703456
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 5909955 ~ 5910256 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1950082
GTATCCTCACTAGTTCTATAGATGAGATATTTAGTATCCTCACAAGACCTTCTGTGACATTCatgttaaccttttactgcagtgggctaaatcagggtcacacagagtgattatTGGTAgacttaaacaaatctactttgaaactaaAGTATActccctcacacacatggttatgggctaatgaaaaaagaagacacctgtaccatgtcagatacagAGTTGACATGTATtgcattttgagtttgcatcccgaTATCACACtttatatactgtacctgtcaaaagtttggacacacctactc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1950082 True 302 lncRNA 0.38 1 5909955 5910256

Neighbor

gene id symbol gene type direction distance location
LOC118936346 dera coding upstream 30664 5865290 ~ 5879297 (+)
LOC110519381 LOC106576618 coding upstream 253368 5611886 ~ 5657179 (+)
LOC110511233 LOC107655547 coding upstream 311903 5563222 ~ 5598052 (+)
LOC118942839 NA coding upstream 314558 5593681 ~ 5595397 (+)
LOC110491886 tmbim4 coding upstream 436961 5457539 ~ 5472994 (+)
LOC118942842 LOC106575061 coding downstream 69095 5979351 ~ 5986641 (+)
LOC110527635 LOC106590880 coding downstream 76519 5986775 ~ 5993790 (+)
mrps33 mrps33 coding downstream 317825 6228081 ~ 6252333 (+)
LOC110500907 braf coding downstream 349557 6259813 ~ 6304321 (+)
LOC118942844 large1 coding downstream 802664 6712920 ~ 6879730 (+)
G1703451 NA non-coding upstream 12426 5897213 ~ 5897529 (+)
G1703449 NA non-coding upstream 21149 5888544 ~ 5888806 (+)
G1703429 NA non-coding upstream 28423 5880871 ~ 5881532 (+)
G1703445 NA non-coding upstream 47118 5862584 ~ 5862837 (+)
G1703457 NA non-coding downstream 2962 5913218 ~ 5913629 (+)
G1703466 NA non-coding downstream 31153 5941409 ~ 5944149 (+)
G1703435 NA non-coding downstream 40260 5950516 ~ 5951083 (+)
G1703478 NA non-coding downstream 88376 5998632 ~ 5999038 (+)
G1703483 NA non-coding downstream 101110 6011366 ~ 6013717 (+)
G1703391 NA other upstream 192254 5717199 ~ 5717701 (+)
G1702856 NA other upstream 655070 5254165 ~ 5254885 (+)
LOC110516940 LOC106609861 other upstream 721108 5182911 ~ 5200193 (+)
G1702793 NA other upstream 855491 5052447 ~ 5054464 (+)
G1703427 LOC106590880 other downstream 73089 5983345 ~ 5994810 (+)
G1703953 NA other downstream 495776 6406032 ~ 6406773 (+)
G1704232 NA other downstream 1096913 7007169 ~ 7007740 (+)

Expression


Co-expression Network