G1703466


Basic Information

Item Value
gene id G1703466
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 5941409 ~ 5944149 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1950092
attacaatgtatccagtcaaaagagtcgttacaatgtatccagtcaaaagagtcgttacaatgtatccagtcaaaagagtcgttacaatgtatccagtcaaaagagtcgttacaatgtatccagtcaaaagagttgttacaatgtatccagtcaaaagagttgttacaatgtatccagtcaaaagagtcgttacaatgtatccagtcaaaagagtcgatacaatgtatcc

Function

NR:

description
putative uncharacterized protein DDB_G0281733 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1950092 True 230 lncRNA 0.36 2 5941409 5944149

Neighbor

gene id symbol gene type direction distance location
LOC118936346 dera coding upstream 62118 5865290 ~ 5879297 (+)
LOC110519381 LOC106576618 coding upstream 284822 5611886 ~ 5657179 (+)
LOC110511233 LOC107655547 coding upstream 343357 5563222 ~ 5598052 (+)
LOC118942839 NA coding upstream 346012 5593681 ~ 5595397 (+)
LOC110491886 tmbim4 coding upstream 468415 5457539 ~ 5472994 (+)
LOC118942842 LOC106575061 coding downstream 35202 5979351 ~ 5986641 (+)
LOC110527635 LOC106590880 coding downstream 42626 5986775 ~ 5993790 (+)
mrps33 mrps33 coding downstream 283932 6228081 ~ 6252333 (+)
LOC110500907 braf coding downstream 315664 6259813 ~ 6304321 (+)
LOC118942844 large1 coding downstream 768771 6712920 ~ 6879730 (+)
G1703457 NA non-coding upstream 27780 5913218 ~ 5913629 (+)
G1703456 NA non-coding upstream 31153 5909955 ~ 5910256 (+)
G1703451 NA non-coding upstream 43880 5897213 ~ 5897529 (+)
G1703449 NA non-coding upstream 52603 5888544 ~ 5888806 (+)
G1703429 NA non-coding upstream 59877 5880871 ~ 5881532 (+)
G1703435 NA non-coding downstream 6367 5950516 ~ 5951083 (+)
G1703478 NA non-coding downstream 54483 5998632 ~ 5999038 (+)
G1703483 NA non-coding downstream 67217 6011366 ~ 6013717 (+)
G1703490 NA non-coding downstream 85190 6029339 ~ 6030265 (+)
G1703499 NA non-coding downstream 109355 6053504 ~ 6066427 (+)
G1703391 NA other upstream 223708 5717199 ~ 5717701 (+)
G1702856 NA other upstream 686524 5254165 ~ 5254885 (+)
LOC110516940 LOC106609861 other upstream 752562 5182911 ~ 5200193 (+)
G1702793 NA other upstream 886945 5052447 ~ 5054464 (+)
G1703427 LOC106590880 other downstream 39196 5983345 ~ 5994810 (+)
G1703953 NA other downstream 461883 6406032 ~ 6406773 (+)
G1704232 NA other downstream 1063020 7007169 ~ 7007740 (+)

Expression


Co-expression Network