Gene
RNA
| Item | Value |
|---|---|
| gene id | G1703435 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 5950516 ~ 5951083 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1950061 | True | 483 | lncRNA | 0.46 | 2 | 5950516 | 5951083 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118936346 | dera | coding | upstream | 71225 | 5865290 ~ 5879297 (+) |
| LOC110519381 | LOC106576618 | coding | upstream | 293929 | 5611886 ~ 5657179 (+) |
| LOC110511233 | LOC107655547 | coding | upstream | 352464 | 5563222 ~ 5598052 (+) |
| LOC118942839 | NA | coding | upstream | 355119 | 5593681 ~ 5595397 (+) |
| LOC110491886 | tmbim4 | coding | upstream | 477522 | 5457539 ~ 5472994 (+) |
| LOC118942842 | LOC106575061 | coding | downstream | 28268 | 5979351 ~ 5986641 (+) |
| LOC110527635 | LOC106590880 | coding | downstream | 35692 | 5986775 ~ 5993790 (+) |
| mrps33 | mrps33 | coding | downstream | 276998 | 6228081 ~ 6252333 (+) |
| LOC110500907 | braf | coding | downstream | 308730 | 6259813 ~ 6304321 (+) |
| LOC118942844 | large1 | coding | downstream | 761837 | 6712920 ~ 6879730 (+) |
| G1703466 | NA | non-coding | upstream | 6367 | 5941409 ~ 5944149 (+) |
| G1703457 | NA | non-coding | upstream | 36887 | 5913218 ~ 5913629 (+) |
| G1703456 | NA | non-coding | upstream | 40260 | 5909955 ~ 5910256 (+) |
| G1703451 | NA | non-coding | upstream | 52987 | 5897213 ~ 5897529 (+) |
| G1703449 | NA | non-coding | upstream | 61710 | 5888544 ~ 5888806 (+) |
| G1703478 | NA | non-coding | downstream | 47549 | 5998632 ~ 5999038 (+) |
| G1703483 | NA | non-coding | downstream | 60283 | 6011366 ~ 6013717 (+) |
| G1703490 | NA | non-coding | downstream | 78256 | 6029339 ~ 6030265 (+) |
| G1703499 | NA | non-coding | downstream | 102421 | 6053504 ~ 6066427 (+) |
| G1703500 | NA | non-coding | downstream | 104411 | 6055494 ~ 6126262 (+) |
| G1703391 | NA | other | upstream | 232815 | 5717199 ~ 5717701 (+) |
| G1702856 | NA | other | upstream | 695631 | 5254165 ~ 5254885 (+) |
| LOC110516940 | LOC106609861 | other | upstream | 761669 | 5182911 ~ 5200193 (+) |
| G1702793 | NA | other | upstream | 896052 | 5052447 ~ 5054464 (+) |
| G1703427 | LOC106590880 | other | downstream | 32262 | 5983345 ~ 5994810 (+) |
| G1703953 | NA | other | downstream | 454949 | 6406032 ~ 6406773 (+) |
| G1704232 | NA | other | downstream | 1056086 | 7007169 ~ 7007740 (+) |
