G1703670


Basic Information

Item Value
gene id G1703670
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 5979455 ~ 5984055 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1950431
AGTTTACACCATAGAGTTCACTTACAGGCTATATAACACTGTGGAGGCAGAGACAAGTTTACACCATAGAGTTCACTTACAGGCTATATAACACTGTGGAGGGAGATGACCACATTCCCATACCTTTCTCGTGAAGCGGAAGTATGCAGTCATAGGAGACATCAGCATCATCTTGAGGACGACGACAGTGGCGTAGGTAGAGAAGGCCAGGAACACCTCGCTGTCTATCATATGAGTTAGCTCTGCCATGGCTGTTCGGTTCGAGTCTCGGTTACGCTTAACGTCTGTTACTGGCGCGCAACTCGTCCTGCCCCGGCTGTAGATTAAACACGCAGAAAAAAACCCCCGTGGATGAACTTTGATGAGTGCGTAAATATATTCCTACCAGTCTGGATTGTACGTCCTTCTTTCTGTAAATCAAGGAGTATATTTCACA
>TU1950432
GGGCTCTATAAGTCTAAGGCGGGCTCTATAAGTCTAGGGGGGCCTCTATAAGGGTGGGCCTACCTTCTCACACGTTCCACATCCGGGTCAACTCTCAGCATCCTCTTCTTGTCCTCTGGAGTCTTAGCCATCCCTGTGTCTTCCATGTTGGCAAAAcactgtggagggagagacaagTTTACACCATAGAGTTCACTTACAGGCTATATAACACTGTGGAGGCAGAGACAAGTTTACACCATAGAGTTCACTTACAGGCTATAAAACACTGGAGGCAGAGACAAGTTTACACCATAGAGTTCACTTACAGGCTATATAACACTGTGGAGGGAGATGACCACATTCCCATACCTTTCTCGTGAAGCGGAAGTATGCAGTCATAGGAGACATCAGCATCATCTTGAGGACGACGACAGTGGCGTAGGTAGAGAAGGCCAGGAACACCTCGCTGTCTATCAACGATGGCGTTTCCTTCATCTTGGTGTCACTCTGCTACGACCAACGAGAGACACTGTAAACAGCATTGGGACTTTTTGCTCTTCATAAAGACGGCATGAACGGTGCGCACCAATATCTACAGGAGTCATCGTGCATACTGATCATGTATTCAATTCCAATGAAACCGCCAACACGCTGGGTCCagacagtgtcacgttctgacctttatttcctttgttttgtcgttatttagtatggtcagggcgtgagttggggtgggcagtctatgtttgttttt

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1950431 False 436 lncRNA 0.46 2 5979455 5983770
TU1950432 True 736 lncRNA 0.47 3 5983067 5984055

Neighbor

gene id symbol gene type direction distance location
LOC118942843 NA coding downstream 27844 5950034 ~ 5963423 (-)
LOC118942841 NA coding downstream 157165 5687945 ~ 5822290 (-)
LOC118942840 NA coding downstream 293239 5652498 ~ 5686229 (-)
LOC110511232 wif1 coding downstream 418032 5496219 ~ 5561423 (-)
vhll NA coding downstream 498556 5478445 ~ 5480899 (-)
LOC110499738 lmo3 coding upstream 83080 6067135 ~ 6188810 (-)
LOC118942797 NA coding upstream 533833 6517888 ~ 6518853 (-)
LOC118942845 LOC106590959 coding upstream 906468 6890523 ~ 6917536 (-)
LOC118942846 LOC105029310 coding upstream 1064841 7048896 ~ 7050907 (-)
LOC118942847 LOC106593057 coding upstream 1319550 7303605 ~ 7307397 (-)
G1703703 NA non-coding downstream 4570 5973366 ~ 5974885 (-)
G1703667 NA non-coding downstream 66743 5912485 ~ 5912712 (-)
G1703666 NA non-coding downstream 68092 5910985 ~ 5911363 (-)
G1703664 NA non-coding downstream 71090 5907890 ~ 5908365 (-)
G1703669 NA non-coding upstream 310 5984365 ~ 5996426 (-)
G1703717 NA non-coding upstream 35905 6019960 ~ 6020452 (-)
G1703725 NA non-coding upstream 55057 6039112 ~ 6041723 (-)
G1703675 NA non-coding upstream 69583 6053638 ~ 6066437 (-)
G1703674 NA non-coding upstream 80346 6064401 ~ 6065606 (-)
G1703658 NA other downstream 79674 5899342 ~ 5899781 (-)
LOC110491889 b2m other downstream 523344 5452948 ~ 5456355 (-)
G1703323 NA other downstream 549283 5429468 ~ 5430889 (-)
LOC118942837 b2mg other downstream 552863 5420336 ~ 5426626 (-)
G1703878 NA other upstream 321498 6305553 ~ 6308220 (-)
G1703896 NA other upstream 358686 6342741 ~ 6343182 (-)
G1704098 NA other upstream 716843 6700898 ~ 6705845 (-)
G1704410 NA other upstream 1165510 7149565 ~ 7149979 (-)

Expression


Co-expression Network