G1703483


Basic Information

Item Value
gene id G1703483
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 6011366 ~ 6013717 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1950115
GACGATGTAATACTCTAGGCATAGAAAATACAGATCTGATTTTAGACTGGTGATGCAACAGGtcatgaggacacaacagttgatgtctcctgttcagtaacatgaggacacgacagttgatgtctcctgttcagtaacatgaggacataacagttactgttcagtaacatgaggacataacagttgatgtctcctgttcagtaacatgaggacataacagttgatgtctcctgttcagtaacatgaggacataacagttgctgttcagtaacatgaggacataacagttactgttcagtaacatgaggacataacagttgatgtctcctgttcagtaacatgaggacataacagttgatgtctcctgttcagtaacatgaggacataacagttactgttcagtaacatgaggacataacagttactgttcagtaacatgaggacacaacagttgatgtctcctgttctgtaacatgaggacacaacagttgatgtctcctgttcagtaacatgaggacacaacagttactgttcagtaacatgaggacacaacagttactgttcagtaacatgaggacacaacagttactgttcagtaacatgaggacataacagttactgttcagtaacatgaggacacaacagttactgttcagtaacatgaggacacaacagttactgttcagtaacatgaggacacaacagttactgttcagtaacatgaggacacaaca

Function

NR:

description
PREDICTED: lysyl oxidase homolog 3 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1950115 True 734 lncRNA 0.40 4 6011366 6013717

Neighbor

gene id symbol gene type direction distance location
LOC110527635 LOC106590880 coding upstream 17576 5986775 ~ 5993790 (+)
LOC118942842 LOC106575061 coding upstream 24725 5979351 ~ 5986641 (+)
LOC118936346 dera coding upstream 132075 5865290 ~ 5879297 (+)
LOC110519381 LOC106576618 coding upstream 354779 5611886 ~ 5657179 (+)
LOC118942839 NA coding upstream 415969 5593681 ~ 5595397 (+)
mrps33 mrps33 coding downstream 214364 6228081 ~ 6252333 (+)
LOC110500907 braf coding downstream 246096 6259813 ~ 6304321 (+)
LOC118942844 large1 coding downstream 699203 6712920 ~ 6879730 (+)
LOC118942849 arhgap8 coding downstream 1513810 7527527 ~ 7561975 (+)
LOC118942991 NA coding downstream 1547627 7561344 ~ 7574758 (+)
G1703478 NA non-coding upstream 12328 5998632 ~ 5999038 (+)
G1703435 NA non-coding upstream 60283 5950516 ~ 5951083 (+)
G1703466 NA non-coding upstream 67217 5941409 ~ 5944149 (+)
G1703457 NA non-coding upstream 97737 5913218 ~ 5913629 (+)
G1703456 NA non-coding upstream 101110 5909955 ~ 5910256 (+)
G1703490 NA non-coding downstream 15622 6029339 ~ 6030265 (+)
G1703499 NA non-coding downstream 39787 6053504 ~ 6066427 (+)
G1703500 NA non-coding downstream 41777 6055494 ~ 6126262 (+)
G1703498 NA non-coding downstream 52842 6066559 ~ 6067288 (+)
G1703503 NA non-coding downstream 53744 6067461 ~ 6068455 (+)
G1703427 LOC106590880 other upstream 16556 5983345 ~ 5994810 (+)
G1703391 NA other upstream 293665 5717199 ~ 5717701 (+)
LOC110511233 LOC107655547 other upstream 414938 5563222 ~ 5598052 (+)
G1702856 NA other upstream 756481 5254165 ~ 5254885 (+)
LOC110516940 LOC106609861 other upstream 822519 5182911 ~ 5200193 (+)
G1703953 NA other downstream 392315 6406032 ~ 6406773 (+)
G1704232 NA other downstream 993452 7007169 ~ 7007740 (+)
G1704409 NA other downstream 1135683 7149400 ~ 7149993 (+)

Expression


Co-expression Network