Gene
RNA
| Item | Value |
|---|---|
| gene id | G1703717 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 6019960 ~ 6020452 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LOW QUALITY PROTEIN: rap guanine nucleotide exchange factor 6 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1950490 | False | 208 | lncRNA | 0.43 | 2 | 6019960 | 6020452 |
| TU1950491 | False | 208 | lncRNA | 0.43 | 2 | 6019960 | 6020452 |
| TU1950492 | True | 265 | lncRNA | 0.43 | 2 | 6019960 | 6020452 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118942843 | NA | coding | downstream | 68349 | 5950034 ~ 5963423 (-) |
| LOC118942841 | NA | coding | downstream | 197670 | 5687945 ~ 5822290 (-) |
| LOC118942840 | NA | coding | downstream | 333744 | 5652498 ~ 5686229 (-) |
| LOC110511232 | wif1 | coding | downstream | 458537 | 5496219 ~ 5561423 (-) |
| vhll | NA | coding | downstream | 539061 | 5478445 ~ 5480899 (-) |
| LOC110499738 | lmo3 | coding | upstream | 46683 | 6067135 ~ 6188810 (-) |
| LOC118942797 | NA | coding | upstream | 497436 | 6517888 ~ 6518853 (-) |
| LOC118942845 | LOC106590959 | coding | upstream | 870071 | 6890523 ~ 6917536 (-) |
| LOC118942846 | LOC105029310 | coding | upstream | 1028444 | 7048896 ~ 7050907 (-) |
| LOC118942847 | LOC106593057 | coding | upstream | 1283153 | 7303605 ~ 7307397 (-) |
| G1703669 | NA | non-coding | downstream | 23534 | 5984365 ~ 5996426 (-) |
| G1703670 | NA | non-coding | downstream | 35905 | 5979455 ~ 5984055 (-) |
| G1703704 | NA | non-coding | downstream | 36950 | 5980875 ~ 5983010 (-) |
| G1703703 | NA | non-coding | downstream | 45075 | 5973366 ~ 5974885 (-) |
| G1703725 | NA | non-coding | upstream | 18660 | 6039112 ~ 6041723 (-) |
| G1703675 | NA | non-coding | upstream | 33186 | 6053638 ~ 6066437 (-) |
| G1703674 | NA | non-coding | upstream | 43949 | 6064401 ~ 6065606 (-) |
| G1703739 | NA | non-coding | upstream | 49523 | 6069975 ~ 6071249 (-) |
| G1703748 | NA | non-coding | upstream | 81748 | 6102200 ~ 6102552 (-) |
| G1703658 | NA | other | downstream | 120179 | 5899342 ~ 5899781 (-) |
| LOC110491889 | b2m | other | downstream | 563849 | 5452948 ~ 5456355 (-) |
| G1703323 | NA | other | downstream | 589788 | 5429468 ~ 5430889 (-) |
| G1703878 | NA | other | upstream | 285101 | 6305553 ~ 6308220 (-) |
| G1703896 | NA | other | upstream | 322289 | 6342741 ~ 6343182 (-) |
| G1704098 | NA | other | upstream | 680446 | 6700898 ~ 6705845 (-) |
| G1704410 | NA | other | upstream | 1129113 | 7149565 ~ 7149979 (-) |
| G1704412 | NA | other | upstream | 1136238 | 7156690 ~ 7157057 (-) |
