Item | Value |
---|---|
gene id | G1703490 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048585.1 |
NCBI id | CM023239.2 |
chromosome length | 64935962 |
location | 6029339 ~ 6030265 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU1950122 | True | 223 | lncRNA | 0.48 | 2 | 6029339 | 6030265 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110527635 | LOC106590880 | coding | upstream | 35549 | 5986775 ~ 5993790 (+) |
LOC118942842 | LOC106575061 | coding | upstream | 42698 | 5979351 ~ 5986641 (+) |
LOC118936346 | dera | coding | upstream | 150048 | 5865290 ~ 5879297 (+) |
LOC110519381 | LOC106576618 | coding | upstream | 372752 | 5611886 ~ 5657179 (+) |
LOC118942839 | NA | coding | upstream | 433942 | 5593681 ~ 5595397 (+) |
mrps33 | mrps33 | coding | downstream | 197816 | 6228081 ~ 6252333 (+) |
LOC110500907 | braf | coding | downstream | 229548 | 6259813 ~ 6304321 (+) |
LOC118942844 | large1 | coding | downstream | 682655 | 6712920 ~ 6879730 (+) |
LOC118942849 | arhgap8 | coding | downstream | 1497262 | 7527527 ~ 7561975 (+) |
LOC118942991 | NA | coding | downstream | 1531079 | 7561344 ~ 7574758 (+) |
G1703483 | NA | non-coding | upstream | 15622 | 6011366 ~ 6013717 (+) |
G1703478 | NA | non-coding | upstream | 30301 | 5998632 ~ 5999038 (+) |
G1703435 | NA | non-coding | upstream | 78256 | 5950516 ~ 5951083 (+) |
G1703466 | NA | non-coding | upstream | 85190 | 5941409 ~ 5944149 (+) |
G1703457 | NA | non-coding | upstream | 115710 | 5913218 ~ 5913629 (+) |
G1703499 | NA | non-coding | downstream | 23239 | 6053504 ~ 6066427 (+) |
G1703500 | NA | non-coding | downstream | 25229 | 6055494 ~ 6126262 (+) |
G1703498 | NA | non-coding | downstream | 36294 | 6066559 ~ 6067288 (+) |
G1703503 | NA | non-coding | downstream | 37196 | 6067461 ~ 6068455 (+) |
G1703527 | NA | non-coding | downstream | 115267 | 6145532 ~ 6146398 (+) |
G1703427 | LOC106590880 | other | upstream | 34529 | 5983345 ~ 5994810 (+) |
G1703391 | NA | other | upstream | 311638 | 5717199 ~ 5717701 (+) |
LOC110511233 | LOC107655547 | other | upstream | 432911 | 5563222 ~ 5598052 (+) |
G1702856 | NA | other | upstream | 774454 | 5254165 ~ 5254885 (+) |
LOC110516940 | LOC106609861 | other | upstream | 840492 | 5182911 ~ 5200193 (+) |
G1703953 | NA | other | downstream | 375767 | 6406032 ~ 6406773 (+) |
G1704232 | NA | other | downstream | 976904 | 7007169 ~ 7007740 (+) |
G1704409 | NA | other | downstream | 1119135 | 7149400 ~ 7149993 (+) |