G1703725


Basic Information

Item Value
gene id G1703725
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 6039112 ~ 6041723 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1950502
cacacacacacacactcagacacacacactcagacactcagacacacacacacacaaagacacacacactcaaacacacacacacacacacacacacacacactcagacactcagacacacacacacacacacacacactcagacacacacacacacacacactcagacacacacactcagacacacacacacacacacacacacacacacacacagacacacactcagacacacacacaaagacacacacgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactcagacacacacacacacacacacacactcagacacacacacacacacacacacacacacacacacacacacacacactcagacacacactcagacacacactcagacacacacacacacacacacacacacacactcagacacacactcagacacacactcagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactcagacacactcaggcacacacacacacactcagagacacacacacacacacactcaaggacacacctacacacactcagagacacacacacacccacgcacacacacatacacactcagacacactcagacacacacacacccacacactcagagacacacacacacacaaacactcacgcacaaacacacgcacacaggcacacacaaacacacacaagcacaaacgctcacacacacacactatccaatCAACACAGTGAATATAGGTCTGTTTGTGGCCCGGCTTCCACCTTAGCCAGTGTCAtgtgtacatcccaaatggcaccctattggtcctggtcaaaagtagtgcactacataggaaatagggcactggtctaaagtagtgcactacatagggaatagggctctggtctaaagtagtgcactacatagggaatagggtgctatataAGACTCAGGCACTGTCATGGTA
>TU1950503
acacacacacacactcacacacacacacacacacacacactcagacacacacacacacacacactcagacacacacacacacacacacacacacacactcagacacacacacacacacacacacacacacacacacactcagacacacacacacacacacacacacacacactcagacacacactcacacactcagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactcagacacactcaggcacacacacacacactcagagacacacacacacacacactcaaggacacacctacacacactcagagacacacacacacccacgcacacacacatacacactcagacacactcagacacacacacacccacacactcagagacacacacacacacaaacactcacgcacaaacacacgcacacaggcacacacaaacacacacaagcacaaacgctcacacacacacactatccaatCAACACAGTGAATATAGGTCTGTTTGTGGCCCGGCTTCCACCTTAGCCAGTGTCAtgtgtacatcccaaatggcaccctattggtcctggtcaaaagtagtgcactacataggaaatagggcactggtctaaagtagtgcactacatagggaatagggctctggtctaaagtagtgcactacatagggaatagggtgctatataAGACTCAGGCACTGTCATGGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1950502 False 1023 lncRNA 0.49 4 6039112 6041382
TU1950503 True 742 lncRNA 0.49 4 6039112 6041723
Loading

Neighbor

gene id symbol gene type direction distance location
LOC118942843 NA coding downstream 87501 5950034 ~ 5963423 (-)
LOC118942841 NA coding downstream 216822 5687945 ~ 5822290 (-)
LOC118942840 NA coding downstream 352896 5652498 ~ 5686229 (-)
LOC110511232 wif1 coding downstream 477689 5496219 ~ 5561423 (-)
vhll NA coding downstream 558213 5478445 ~ 5480899 (-)
LOC110499738 lmo3 coding upstream 25412 6067135 ~ 6188810 (-)
LOC118942797 NA coding upstream 476165 6517888 ~ 6518853 (-)
LOC118942845 LOC106590959 coding upstream 848800 6890523 ~ 6917536 (-)
LOC118942846 LOC105029310 coding upstream 1007173 7048896 ~ 7050907 (-)
LOC118942847 LOC106593057 coding upstream 1261882 7303605 ~ 7307397 (-)
G1703717 NA non-coding downstream 18660 6019960 ~ 6020452 (-)
G1703669 NA non-coding downstream 42686 5984365 ~ 5996426 (-)
G1703670 NA non-coding downstream 55057 5979455 ~ 5984055 (-)
G1703704 NA non-coding downstream 56102 5980875 ~ 5983010 (-)
G1703703 NA non-coding downstream 64227 5973366 ~ 5974885 (-)
G1703675 NA non-coding upstream 11915 6053638 ~ 6066437 (-)
G1703674 NA non-coding upstream 22678 6064401 ~ 6065606 (-)
G1703739 NA non-coding upstream 28252 6069975 ~ 6071249 (-)
G1703748 NA non-coding upstream 60477 6102200 ~ 6102552 (-)
G1703756 NA non-coding upstream 85311 6127034 ~ 6127516 (-)
G1703658 NA other downstream 139331 5899342 ~ 5899781 (-)
LOC110491889 b2m other downstream 583001 5452948 ~ 5456355 (-)
G1703323 NA other downstream 608940 5429468 ~ 5430889 (-)
G1703878 NA other upstream 263830 6305553 ~ 6308220 (-)
G1703896 NA other upstream 301018 6342741 ~ 6343182 (-)
G1704098 NA other upstream 659175 6700898 ~ 6705845 (-)
G1704410 NA other upstream 1107842 7149565 ~ 7149979 (-)
G1704412 NA other upstream 1114967 7156690 ~ 7157057 (-)

Expression

G1703725 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 6.
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G1703725 Expression in each Bioproject

Bar chart with 19 bars.
G1703725 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 150.
End of interactive chart.

Co-expression Network