Gene
RNA
| Item | Value |
|---|---|
| gene id | G1703499 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 6053504 ~ 6066427 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1950134 | True | 470 | lncRNA | 0.50 | 2 | 6053504 | 6066427 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527635 | LOC106590880 | coding | upstream | 59714 | 5986775 ~ 5993790 (+) |
| LOC118942842 | LOC106575061 | coding | upstream | 66863 | 5979351 ~ 5986641 (+) |
| LOC118936346 | dera | coding | upstream | 174213 | 5865290 ~ 5879297 (+) |
| LOC110519381 | LOC106576618 | coding | upstream | 396917 | 5611886 ~ 5657179 (+) |
| LOC118942839 | NA | coding | upstream | 458107 | 5593681 ~ 5595397 (+) |
| mrps33 | mrps33 | coding | downstream | 161654 | 6228081 ~ 6252333 (+) |
| LOC110500907 | braf | coding | downstream | 193386 | 6259813 ~ 6304321 (+) |
| LOC118942844 | large1 | coding | downstream | 646493 | 6712920 ~ 6879730 (+) |
| LOC118942849 | arhgap8 | coding | downstream | 1461100 | 7527527 ~ 7561975 (+) |
| LOC118942991 | NA | coding | downstream | 1494917 | 7561344 ~ 7574758 (+) |
| G1703490 | NA | non-coding | upstream | 23239 | 6029339 ~ 6030265 (+) |
| G1703483 | NA | non-coding | upstream | 39787 | 6011366 ~ 6013717 (+) |
| G1703478 | NA | non-coding | upstream | 54466 | 5998632 ~ 5999038 (+) |
| G1703435 | NA | non-coding | upstream | 102421 | 5950516 ~ 5951083 (+) |
| G1703466 | NA | non-coding | upstream | 109355 | 5941409 ~ 5944149 (+) |
| G1703498 | NA | non-coding | downstream | 132 | 6066559 ~ 6067288 (+) |
| G1703503 | NA | non-coding | downstream | 1034 | 6067461 ~ 6068455 (+) |
| G1703527 | NA | non-coding | downstream | 79105 | 6145532 ~ 6146398 (+) |
| G1703537 | NA | non-coding | downstream | 100740 | 6167167 ~ 6168355 (+) |
| G1703786 | NA | non-coding | downstream | 125503 | 6191930 ~ 6193531 (+) |
| G1703427 | LOC106590880 | other | upstream | 58694 | 5983345 ~ 5994810 (+) |
| G1703391 | NA | other | upstream | 335803 | 5717199 ~ 5717701 (+) |
| LOC110511233 | LOC107655547 | other | upstream | 457076 | 5563222 ~ 5598052 (+) |
| G1702856 | NA | other | upstream | 798619 | 5254165 ~ 5254885 (+) |
| LOC110516940 | LOC106609861 | other | upstream | 864657 | 5182911 ~ 5200193 (+) |
| G1703953 | NA | other | downstream | 339605 | 6406032 ~ 6406773 (+) |
| G1704232 | NA | other | downstream | 940742 | 7007169 ~ 7007740 (+) |
| G1704409 | NA | other | downstream | 1082973 | 7149400 ~ 7149993 (+) |
