G1703500


Basic Information

Item Value
gene id G1703500
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 6055494 ~ 6126262 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1950137
agagagagagagagagagagagagagagagagagagagacagagagagagagagagacagagagagagagagagagagagagacagagagagtctacCAAAGCCCTGGGTCTGGTTAGAGTCATTACAATATGGAAATAGTTAAGACTTACTGCAAACCCTAATGGGAACTGACTTATATCCCTCCTGACTTCTAACCTCTTATCTCCCCTGACTTCTAACCTCTTATATCCCCCCTGACTTCTAACCTcttatag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1950137 True 256 lncRNA 0.45 2 6055494 6126262

Neighbor

gene id symbol gene type direction distance location
LOC110527635 LOC106590880 coding upstream 61704 5986775 ~ 5993790 (+)
LOC118942842 LOC106575061 coding upstream 68853 5979351 ~ 5986641 (+)
LOC118936346 dera coding upstream 176203 5865290 ~ 5879297 (+)
LOC110519381 LOC106576618 coding upstream 398907 5611886 ~ 5657179 (+)
LOC118942839 NA coding upstream 460097 5593681 ~ 5595397 (+)
mrps33 mrps33 coding downstream 101819 6228081 ~ 6252333 (+)
LOC110500907 braf coding downstream 133551 6259813 ~ 6304321 (+)
LOC118942844 large1 coding downstream 586658 6712920 ~ 6879730 (+)
LOC118942849 arhgap8 coding downstream 1401265 7527527 ~ 7561975 (+)
LOC118942991 NA coding downstream 1435082 7561344 ~ 7574758 (+)
G1703490 NA non-coding upstream 25229 6029339 ~ 6030265 (+)
G1703483 NA non-coding upstream 41777 6011366 ~ 6013717 (+)
G1703478 NA non-coding upstream 56456 5998632 ~ 5999038 (+)
G1703435 NA non-coding upstream 104411 5950516 ~ 5951083 (+)
G1703466 NA non-coding upstream 111345 5941409 ~ 5944149 (+)
G1703527 NA non-coding downstream 19270 6145532 ~ 6146398 (+)
G1703537 NA non-coding downstream 40905 6167167 ~ 6168355 (+)
G1703786 NA non-coding downstream 65668 6191930 ~ 6193531 (+)
G1703792 NA non-coding downstream 77029 6203291 ~ 6227144 (+)
G1703799 NA non-coding downstream 127132 6253394 ~ 6253927 (+)
G1703427 LOC106590880 other upstream 60684 5983345 ~ 5994810 (+)
G1703391 NA other upstream 337793 5717199 ~ 5717701 (+)
LOC110511233 LOC107655547 other upstream 459066 5563222 ~ 5598052 (+)
G1702856 NA other upstream 800609 5254165 ~ 5254885 (+)
LOC110516940 LOC106609861 other upstream 866647 5182911 ~ 5200193 (+)
G1703953 NA other downstream 279770 6406032 ~ 6406773 (+)
G1704232 NA other downstream 880907 7007169 ~ 7007740 (+)
G1704409 NA other downstream 1023138 7149400 ~ 7149993 (+)

Expression


Co-expression Network