Gene
RNA
| Item | Value |
|---|---|
| gene id | G1703527 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 6145532 ~ 6146398 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1950170 | True | 809 | lncRNA | 0.39 | 2 | 6145532 | 6146398 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527635 | LOC106590880 | coding | upstream | 151742 | 5986775 ~ 5993790 (+) |
| LOC118942842 | LOC106575061 | coding | upstream | 158891 | 5979351 ~ 5986641 (+) |
| LOC118936346 | dera | coding | upstream | 266241 | 5865290 ~ 5879297 (+) |
| LOC110519381 | LOC106576618 | coding | upstream | 488945 | 5611886 ~ 5657179 (+) |
| LOC118942839 | NA | coding | upstream | 550135 | 5593681 ~ 5595397 (+) |
| mrps33 | mrps33 | coding | downstream | 81683 | 6228081 ~ 6252333 (+) |
| LOC110500907 | braf | coding | downstream | 113415 | 6259813 ~ 6304321 (+) |
| LOC118942844 | large1 | coding | downstream | 566522 | 6712920 ~ 6879730 (+) |
| LOC118942849 | arhgap8 | coding | downstream | 1381129 | 7527527 ~ 7561975 (+) |
| LOC118942991 | NA | coding | downstream | 1414946 | 7561344 ~ 7574758 (+) |
| G1703500 | NA | non-coding | upstream | 19270 | 6055494 ~ 6126262 (+) |
| G1703503 | NA | non-coding | upstream | 77077 | 6067461 ~ 6068455 (+) |
| G1703498 | NA | non-coding | upstream | 78244 | 6066559 ~ 6067288 (+) |
| G1703499 | NA | non-coding | upstream | 79105 | 6053504 ~ 6066427 (+) |
| G1703490 | NA | non-coding | upstream | 115267 | 6029339 ~ 6030265 (+) |
| G1703537 | NA | non-coding | downstream | 20769 | 6167167 ~ 6168355 (+) |
| G1703786 | NA | non-coding | downstream | 45532 | 6191930 ~ 6193531 (+) |
| G1703792 | NA | non-coding | downstream | 56893 | 6203291 ~ 6227144 (+) |
| G1703799 | NA | non-coding | downstream | 106996 | 6253394 ~ 6253927 (+) |
| G1703820 | NA | non-coding | downstream | 109514 | 6255912 ~ 6256569 (+) |
| G1703427 | LOC106590880 | other | upstream | 150722 | 5983345 ~ 5994810 (+) |
| G1703391 | NA | other | upstream | 427831 | 5717199 ~ 5717701 (+) |
| LOC110511233 | LOC107655547 | other | upstream | 549104 | 5563222 ~ 5598052 (+) |
| G1702856 | NA | other | upstream | 890647 | 5254165 ~ 5254885 (+) |
| LOC110516940 | LOC106609861 | other | upstream | 956685 | 5182911 ~ 5200193 (+) |
| G1703953 | NA | other | downstream | 259634 | 6406032 ~ 6406773 (+) |
| G1704232 | NA | other | downstream | 860771 | 7007169 ~ 7007740 (+) |
| G1704409 | NA | other | downstream | 1003002 | 7149400 ~ 7149993 (+) |
