G1703786


Basic Information

Item Value
gene id G1703786
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 6191930 ~ 6193531 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1950571
GGTGGTTCAGTCCAGATATATCTTCTTCTTCTCTAAACAGACTATGTTGGGTGGTTCAGTCCAGatatatcttcttcttcttctctaaacAGACTATGTTGGGTGGTTCAGTCCAGATATATCTTCTTCTTCTCTAAACAGACTATGTTGGGTGGTTCAGTCCAGatatatcttcttcttcttctctaaacAGACTATGTTGGGTGGTTCAGTCCAGATATATCTTCTTCTTCTCTAAACAGACTATGTTGGGTGGTTCAGTCCAGATatatcttcttcttctcctctaaaCAGACTATGTTGGGTGGTTCAGTCCAGatatatcttcttcttcttctctaaacAGACTATGTTGGGTGGTTCAGTCCAGATatatcttcttcttctcctctaaaCAGACTATGTTGGGTGGTTCAGTCCAGatatatcttcttcttcttctctaaacAGACTATGTTGGGTGGTTCAGTCCAGAtttatcttcttcttctctaAACAGACTATGTTGGGTGGTTCAGTCCAGATATATCTTCTTCTTCTCTAAACAGACTATGTTGGGTGGTTCAGTCCAGATATATCTTCTTCTTCTCTAAACAGACTATGTTGGGTGGTTCAGTCCAGATatatcttcttcttctcctctaaaCAGACTATGTTGGGTGGTTCAGTCCAGatatatcttcttcTTCTCTAAACAGACTATGTTGGGTGGTTCAGTCCAGATATATCTTCTTCTCTAAACAGACTATGTTGGGTGGTTCAGTCCAGTTATATCTTCTTCTTCTCTAAACAGACTATGTTGGGTGGTTCAGTCCAGATATATCTTCTTCTTCTCTAAACGGGCAATGTTGGGTGGTTCAGTTAATTCATTTCTTCTTCTCTAAACGGGATATGTTGGGTGAATCAATGTGTTCCTGTGTCTGTATTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1950571 True 928 lncRNA 0.39 3 6191930 6193531

Neighbor

gene id symbol gene type direction distance location
LOC110527635 LOC106590880 coding upstream 198140 5986775 ~ 5993790 (+)
LOC118942842 LOC106575061 coding upstream 205289 5979351 ~ 5986641 (+)
LOC118936346 dera coding upstream 312639 5865290 ~ 5879297 (+)
LOC110519381 LOC106576618 coding upstream 535343 5611886 ~ 5657179 (+)
LOC118942839 NA coding upstream 596533 5593681 ~ 5595397 (+)
mrps33 mrps33 coding downstream 34550 6228081 ~ 6252333 (+)
LOC110500907 braf coding downstream 66282 6259813 ~ 6304321 (+)
LOC118942844 large1 coding downstream 519389 6712920 ~ 6879730 (+)
LOC118942849 arhgap8 coding downstream 1333996 7527527 ~ 7561975 (+)
LOC118942991 NA coding downstream 1367813 7561344 ~ 7574758 (+)
G1703537 NA non-coding upstream 23575 6167167 ~ 6168355 (+)
G1703527 NA non-coding upstream 45532 6145532 ~ 6146398 (+)
G1703500 NA non-coding upstream 65668 6055494 ~ 6126262 (+)
G1703503 NA non-coding upstream 123475 6067461 ~ 6068455 (+)
G1703498 NA non-coding upstream 124642 6066559 ~ 6067288 (+)
G1703792 NA non-coding downstream 9760 6203291 ~ 6227144 (+)
G1703799 NA non-coding downstream 59863 6253394 ~ 6253927 (+)
G1703820 NA non-coding downstream 62381 6255912 ~ 6256569 (+)
G1703817 NA non-coding downstream 70647 6264178 ~ 6322504 (+)
G1703827 NA non-coding downstream 78222 6271753 ~ 6272269 (+)
G1703427 LOC106590880 other upstream 197120 5983345 ~ 5994810 (+)
G1703391 NA other upstream 474229 5717199 ~ 5717701 (+)
LOC110511233 LOC107655547 other upstream 595502 5563222 ~ 5598052 (+)
G1702856 NA other upstream 937045 5254165 ~ 5254885 (+)
LOC110516940 LOC106609861 other upstream 1003083 5182911 ~ 5200193 (+)
G1703953 NA other downstream 212501 6406032 ~ 6406773 (+)
G1704232 NA other downstream 813638 7007169 ~ 7007740 (+)
G1704409 NA other downstream 955869 7149400 ~ 7149993 (+)

Expression


Co-expression Network