G1703799


Basic Information

Item Value
gene id G1703799
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 6253394 ~ 6253927 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1950627
tcgctctctcgctgcctctctctcgctctctcgctgcctctctctctgtgtaatatCCTCTGTCCCAGAGAGCTGGTCTCTTTTGGTTGCTCATCATGAGACCAGAACACTCATTCAACTCCATGGCAGTTAAACCATCATAATCTGGAGTAATTTGTTCAGCTGCTCTATTATTACGTCCACGATAATACATTTAACATAATGATAACCCCAATGATAGGTTTCAGTACGTGAAGGTAGGACTTGTAAGATGTGTTTTTCACTCTGCCCCCCCCCAGTGTGCACTCAGAATGGTGTGTCCCAGGGTcaaaggagagatgaggagatgcAGCccttctacactgaacaaaaatataaacacaatacgTAATGTTTTGGTTCcatgagcag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1950627 True 390 lncRNA 0.45 2 6253394 6253927

Neighbor

gene id symbol gene type direction distance location
mrps33 mrps33 coding upstream 1061 6228081 ~ 6252333 (+)
LOC110527635 LOC106590880 coding upstream 259604 5986775 ~ 5993790 (+)
LOC118942842 LOC106575061 coding upstream 266753 5979351 ~ 5986641 (+)
LOC118936346 dera coding upstream 374103 5865290 ~ 5879297 (+)
LOC110519381 LOC106576618 coding upstream 596807 5611886 ~ 5657179 (+)
LOC110500907 braf coding downstream 5886 6259813 ~ 6304321 (+)
LOC118942844 large1 coding downstream 458993 6712920 ~ 6879730 (+)
LOC118942849 arhgap8 coding downstream 1273600 7527527 ~ 7561975 (+)
LOC118942991 NA coding downstream 1307417 7561344 ~ 7574758 (+)
LOC110510398 LOC106591976 coding downstream 1546739 7800666 ~ 7829915 (+)
G1703792 NA non-coding upstream 26250 6203291 ~ 6227144 (+)
G1703786 NA non-coding upstream 59863 6191930 ~ 6193531 (+)
G1703537 NA non-coding upstream 85039 6167167 ~ 6168355 (+)
G1703527 NA non-coding upstream 106996 6145532 ~ 6146398 (+)
G1703503 NA non-coding upstream 184939 6067461 ~ 6068455 (+)
G1703820 NA non-coding downstream 1985 6255912 ~ 6256569 (+)
G1703817 NA non-coding downstream 10251 6264178 ~ 6322504 (+)
G1703827 NA non-coding downstream 17826 6271753 ~ 6272269 (+)
G1703835 NA non-coding downstream 35959 6289886 ~ 6290314 (+)
G1703836 NA non-coding downstream 43887 6297814 ~ 6299322 (+)
G1703427 LOC106590880 other upstream 258584 5983345 ~ 5994810 (+)
G1703391 NA other upstream 535693 5717199 ~ 5717701 (+)
LOC110511233 LOC107655547 other upstream 656966 5563222 ~ 5598052 (+)
G1702856 NA other upstream 998509 5254165 ~ 5254885 (+)
G1703953 NA other downstream 152105 6406032 ~ 6406773 (+)
G1704232 NA other downstream 753242 7007169 ~ 7007740 (+)
G1704409 NA other downstream 895473 7149400 ~ 7149993 (+)

Expression


Co-expression Network