G1703827


Basic Information

Item Value
gene id G1703827
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 6271753 ~ 6272269 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1950684
ggtggcagcgtactctcattagacagtagttggggagagatgtcctgggcctctgctgtgcaggtggcagcgtactctcgATCTCTGTAATTGTTTCGCTCCTTTATTGCGTTGATGCATTTCTTCATCGTATGTTACGTCAGTTTTAAAAACCACAGCCTTTTGCCATAATTACAACACCAACCTCCTCTGCGTTGTTTTTACATGTAGTTTCCTGTTTTCTTCACTGGAAGGTCAAGTCTTCATTAGAAGTGTCATGCTACATAAAGGGGAGGATGTGGCCTAAAGTACAGATGACTTAAGCTACAGGATTTAGGGTTGTGATGCTAGGCTATTAGCTCGTTGACGATAATAAGCGCACAGTTCTGTTGACGTCCGTGTGATTGGAGCCCAGTCTGTGTCTTGGTAGATGTACTCTTGGTTCTCTACTGTAATGCTGTCATGCTACATAAAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1950684 True 455 lncRNA 0.45 2 6271753 6272269

Neighbor

gene id symbol gene type direction distance location
mrps33 mrps33 coding upstream 19420 6228081 ~ 6252333 (+)
LOC110527635 LOC106590880 coding upstream 277963 5986775 ~ 5993790 (+)
LOC118942842 LOC106575061 coding upstream 285112 5979351 ~ 5986641 (+)
LOC118936346 dera coding upstream 392462 5865290 ~ 5879297 (+)
LOC110519381 LOC106576618 coding upstream 615166 5611886 ~ 5657179 (+)
LOC118942844 large1 coding downstream 440651 6712920 ~ 6879730 (+)
LOC118942849 arhgap8 coding downstream 1255258 7527527 ~ 7561975 (+)
LOC118942991 NA coding downstream 1289075 7561344 ~ 7574758 (+)
LOC110510398 LOC106591976 coding downstream 1528397 7800666 ~ 7829915 (+)
LOC118942850 NA coding downstream 1531011 7803280 ~ 7805680 (+)
G1703820 NA non-coding upstream 15184 6255912 ~ 6256569 (+)
G1703799 NA non-coding upstream 17826 6253394 ~ 6253927 (+)
G1703792 NA non-coding upstream 44609 6203291 ~ 6227144 (+)
G1703786 NA non-coding upstream 78222 6191930 ~ 6193531 (+)
G1703537 NA non-coding upstream 103398 6167167 ~ 6168355 (+)
G1703835 NA non-coding downstream 17617 6289886 ~ 6290314 (+)
G1703836 NA non-coding downstream 25545 6297814 ~ 6299322 (+)
G1703813 NA non-coding downstream 33284 6305553 ~ 6308221 (+)
G1703838 NA non-coding downstream 36326 6308595 ~ 6310383 (+)
G1703849 NA non-coding downstream 64649 6336918 ~ 6339074 (+)
G1703427 LOC106590880 other upstream 276943 5983345 ~ 5994810 (+)
G1703391 NA other upstream 554052 5717199 ~ 5717701 (+)
LOC110511233 LOC107655547 other upstream 675325 5563222 ~ 5598052 (+)
G1702856 NA other upstream 1016868 5254165 ~ 5254885 (+)
G1703953 NA other downstream 133763 6406032 ~ 6406773 (+)
G1704232 NA other downstream 734900 7007169 ~ 7007740 (+)
G1704409 NA other downstream 877131 7149400 ~ 7149993 (+)

Expression


Co-expression Network