G1703813


Basic Information

Item Value
gene id G1703813
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 6305553 ~ 6308221 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1950660
TTTGTCGATGTCGTTTTGCCTTTTTCATTTTGTAGACAGGCAGGCCTGTAAAACTATTGAGTCATTTGTTAATGACATTTTCTGAATTGTGGTTATTGAGACCGGGAGAGCCATCTAGTGTTGTTTTAACTTCTTCTGTCTCTTTGGGAGGAGATGTATCGAAGAAGCAAAAACAGCAACTTCcctttttttaaaatttattttaatgttttattaaGAAATAAATCCCGTCACAACATGAATTTTTAAGTTGTTGACTAACACCCCTAAACTCAATATCCAAAACGCATCATGTTCCGTCTGTAAAGGGAACACGGTTGATGTTCTGTTGGGGAAGCCAAAAAAAGCTGTGTAAGATGGGGTATTGGCTACGTCCCCAGACGGTTCCCCATTCCCTTTACGGTGCGGTGCACTCGGTCGGCTCAGGTAGTGTTCCCTTGGAGAAGGAATATAGGGGCTCCATTTGGGACGAAGACACCGGTCGTCACGTGAAGAATTAAACACCCGACGAGGACCTCCTATGAACCCGCTGAACGGATATGGCTGGTTTCTCCACTGTAGAAGAACAGCCAATGGAGAATCTACCATTTGACATGATCGGTTTTAGGACTGTGCTTAAACTGTGTCTGGGGAAACTGGCCCATAGATTAGGCCCAGGAGGAGCAAATCATAATACTGGAGGTTTAACCAGAATAGAGATGTGGACTTCTGCCATGAGATGTATAATGTTATGGATTTTTCTGAAGGACATCGTTTCCATTACACTGGGTCTTCAGTTCACTGTGACCCAACCCAAGATATGACCCCCGAGGGACTAACAGCAGGATATGACCCCCGAGGGACTAACAGCAGGATATGACCCCCGAGGGACTAACAGCAGGATATGACCCCCGAGGGACTAACAGCAGGATATGACCCCCGAGGGACTAACAGCAGGATATGACCCCCGAGGGACTAACAGTGGATATGACCCCCGAGGGACTAACAGCAGGATATGACCCCCGAGGGACTAACAGCAGGATATGACCCCCGAGGGACTAACAGCAGGAATCTGTCAAATAAAGGGGttttccgagtggcgcagcagtcccaggctagaggcatcactacagactctggttcgattccgggctgtatcacaaccggccgtgattgggagtcccataggggcggcgcacagttggcccagcgtcgtccgggtttggcccggtgCTAGGgcatcattgtaaatatgaatttgtccttaactgacttgcctagttaaataaaggatcagATAAATAGGACCCCGGGGGGAGCTAACGGCAGGAAGGAGTTGTTACGAGTGCTCTTATTATTTTACAGATCGAcaggcatcccaaatggcaccttattccctttatagtgccccccttttgaccagggcccatagggctctatgtagggaatagggatccatttgatagggttccatttgatagggttccatttgaaagGGTTCCATTTGAAAGGGTTCCATttgatagggttccatttgaaagGGTTCCATttgatagggttccatttgatagggttccatttgaaagGGTTCCATTTGAAAGGGTTCCATttgatagggttccatttgatagggttccatttgaaagGGTTCCATttgatagggttccatttaggatgCATACAGCCATGTtctttatattatgatatatatgCTGTTGCAGCAGACTGTGGATGTCTTCACAAGCATTGGTCTATCAAAAGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctccatcaAAGCTATGAGACTCTACTGACAACCTGTTGAGTTGTCGTCCTCTCTCCATCAAAGCGTTGTTGCCTGTTATGGTTTACTTCTATTTGTATTACTTTACTGTAAGCCGTTTCGAACCCCGTATCTGTCCTTGCCTGAAGCCGACGTATTCCACAAGCCACCTCCCAAACGACACCTTCATCCTCCTGGGAGATGATCGTCGTCCTCTGTATATAGCTGTATAAAGGGAGATATTGGCCGTTTTTGAAATAGGAGGCATGGTGACTCTCAACATGgaatgagat
>TU1950649
gatatatatgCTGTTGCAGCAGACTGTGGATGTCTTCACAAGCATTGGTCTATCAAAAGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctctccatcaaaGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctctccatcaaaGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctctccatcaaaGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctccatcaAAGCTATGAGACTGACAACCTGTTGAgttgtcctcctctctccatcaaaGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctccatcaAAGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctccatcaAAGCTATGAGACTCTACTGACAACCTGTTGAGTTGTCGTCCTCCTCTCCATCAAAGCGTTGTTGCCTGTTATGGTTTACTTCTATTTGTATTACTTTACTGTAAGCCGTTTCGAACCCCGTATCTGTCCTTGCCTGAAGCCGACGTATTCCACAAGCCACCTCCCAAACGACACCTTCATCCTCCTGGGAGATGATCGTCGTCCTCTGTATATAGCTGTATAAAGGGAGATATTGGCCGTTTTTGAAATAGGAGGCATGGTGACTCTCAACATGgaatgagat
>TU1950652
gatatatatgCTGTTGCAGCAGACTGTGGATGTCTTCACAAGCATTGGTCTATCAAAAGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctctccatcaaaGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctctccatcaaaGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctctccatcaaaGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctccatcaAAGCTATGAGACTGACAACCTGTTGAgttgtcctcctctctccatcaaaGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctccatcaAAGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctccatcaAAGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctccatcaAAGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctctccatcaaaGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctcCTCTCCATCAAAGCGTTGTTGCCTGTTATGGTTTACTTCTATTTGTATTACTTTACTGTAAGCCGTTTCGAACCCCGTATCTGTCCTTGCCTGAAGCCGACGTATTCCACAAGCCACCTCCCAAACGACACCTTCATCCTCCTGGGAGATGATCGTCGTCCTCTGTATATAGCTGTATAAAGGGAGATATTGGCCGTTTTTGAAATAGGAGGCATGGTGACTCTCAACATGgaatgagat
>TU1950653
gatatatatgCTGTTGCAGCAGACTGTGGATGTCTTCACAAGCATTGGTCTATCAAAAGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctctccatcaaaGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctctccatcaaaGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctctccatcaaaGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctccatcaAAGCTATGAGACTGACAACCTGTTGAgttgtcctcctctctccatcaaaGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctccatcaAAGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctccatcaAAGCTATGAGACTCTACTGACAACCTGTTGAGTTGTCGTCCTCCTCTCCATCAAAGCTATGAGACTGACAACCTGTTGAgttgtcctcctctccatcaAAGCTATGAGACTCTACTGACAACATGTTGAgttgtcctcctctctccatcaaaGCTATGATACTGACAACCTGTTGAgttgtcctcctctccatcaAAGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctcCTCTCCATCAAAGCGTTGTTGCCTGTTATGGTTTACTTCTATTTGTATTACTTTACTGTAAGCCGTTTCGAACCCCGTATCTGTCCTTGCCTGAAGCCGACGTATTCCACAAGCCACCTCCCAAACGACACCTTCATCCTCCTGGGAGATGATCGTCGTCCTCTGTATATAGCTGTATAAAGGGAGATATTGGCCGTTTTTGAAATAGGAGGCATGGTGACTCTCAACATGgaatgagat
>TU1950654
gatatatatgCTGTTGCAGCAGACTGTGGATGTCTTCACAAGCATTGGTCTATCAAAAGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctctccatcaaaGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctctccatcaaaGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctctccatcaaaGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctccatcaAAGCTATGAGACTGACAACCTGTTGAgttgtcctcctctctccatcaaaGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctccatcaAAGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctctccatcaaaGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctcCTCTCCATCAAAGCGTTGTTGCCTGTTATGGTTTACTTCTATTTGTATTACTTTACTGTAAGCCGTTTCGAACCCCGTATCTGTCCTTGCCTGAAGCCGACGTATTCCACAAGCCACCTCCCAAACGACACCTTCATCCTCCTGGGAGATGATCGTCGTCCTCTGTATATAGCTGTATAAAGGGAGATATTGGCCGTTTTTGAAATAGGAGGCATGGTGACTCTCAACATGgaatgagat
>TU1950655
gatatatatgCTGTTGCAGCAGACTGTGGATGTCTTCACAAGCATTGGTCTATCAAAAGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctctccatcaaaGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctctccatcaaaGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctctccatcaaaGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctccatcaAAGCTATGAGACTGACAACCTGTTGAgttgtcctcctctctccatcaaaGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctccatcaAAGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctccatcaAAGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctctccatcaaaGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctccatcaAAGCTATGAGACTCTACTGACAACCTGTTGAGTTGTCGTCCTCTCTCCATCAAAGCGTTGTTGCCTGTTATGGTTTACTTCTATTTGTATTACTTTACTGTAAGCCGTTTCGAACCCCGTATCTGTCCTTGCCTGAAGCCGACGTATTCCACAAGCCACCTCCCAAACGACACCTTCATCCTCCTGGGAGATGATCGTCGTCCTCTGTATATAGCTGTATAAAGGGAGATATTGGCCGTTTTTGAAATAGGAGGCATGGTGACTCTCAACATGgaatgagat
>TU1950656
gatatatatgCTGTTGCAGCAGACTGTGGATGTCTTCACAAGCATTGGTCTATCAAAAGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctctccatcaaaGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctctccatcaaaGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctctccatcaaaGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctccatcaAAGCTATGAGACTGACAACCTGTTGAgttgtcctcctctctccatcaaaGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctccatcaAAGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctccatcaAAGCTATGAGACTCTACTGACAACCTGTTGAGTTGTCGTCCTCCTCTCCATCAAAGCTATGAGACTGACAACCTGTTGAgttgtcgtcctcctctccatcaAAGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctctccatcaaaGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctccatcaAAGCTATGAGACTCTACTGACAACCTGTTGAGTTGTCGTCCTCTCTCCATCAAAGCGTTGTTGCCTGTTATGGTTTACTTCTATTTGTATTACTTTACTGTAAGCCGTTTCGAACCCCGTATCTGTCCTTGCCTGAAGCCGACGTATTCCACAAGCCACCTCCCAAACGACACCTTCATCCTCCTGGGAGATGATCGTCGTCCTCTGTATATAGCTGTATAAAGGGAGATATTGGCCGTTTTTGAAATAGGAGGCATGGTGACTCTCAACATGgaatgagat
>TU1950657
gatatatatgCTGTTGCAGCAGACTGTGGATGTCTTCACAAGCATTGGTCTATCAAAAGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctctccatcaaaGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctctccatcaaaGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctctccatcaaaGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctccatcaAAGCTATGAGACTGACAACCTGTTGAgttgtcctcctctctccatcaaaGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctccatcaAAGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctccatcaAAGCTATGAGACTCTACTGACAACCTGTTGAGTTGTCGTCCTCccatcaAAGCTATGAGACTCTACTGACAACCTGTTGAGTTGTCGTCCTCTCTCCATCAAAGCGTTGTTGCCTGTTATGGTTTACTTCTATTTGTATTACTTTACTGTAAGCCGTTTCGAACCCCGTATCTGTCCTTGCCTGAAGCCGACGTATTCCACAAGCCACCTCCCAAACGACACCTTCATCCTCCTGGGAGATGATCGTCGTCCTCTGTATATAGCTGTATAAAGGGAGATATTGGCCGTTTTTGAAATAGGAGGCATGGTGACTCTCAACATGgaatgagat
>TU1950658
gatatatatgCTGTTGCAGCAGACTGTGGATGTCTTCACAAGCATTGGTCTATCAAAAGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctctccatcaaaGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctctccatcaaaGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctctccatcaaaGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctccatcaAAGCTATGAGACTGACAACCTGTTGAgttgtcctcctctctccatcaaaGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctctccatcaaaGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctcCTCTCCATCAAAGCGTTGTTGCCTGTTATGGTTTACTTCTATTTGTATTACTTTACTGTAAGCCGTTTCGAACCCCGTATCTGTCCTTGCCTGAAGCCGACGTATTCCACAAGCCACCTCCCAAACGACACCTTCATCCTCCTGGGAGATGATCGTCGTCCTCTGTATATAGCTGTATAAAGGGAGATATTGGCCGTTTTTGAAATAGGAGGCATGGTGACTCTCAACATGgaatgagat
>TU1950659
gatatatatgCTGTTGCAGCAGACTGTGGATGTCTTCACAAGCATTGGTCTATCAAAAGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctctccatcaaaGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctctccatcaaaGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctctccatcaaaGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctccatcaAAGCTATGAGACTGACAACCTGTTGAGTTGTCGTCCTCCTCTCCATCAAAGCTGTTGTTGCCTGTTATGGTTTACTTCTATTTGTATTACTTTACTGTAAGCCGTTTCGAACCCCGTATCTGTCCTTGCCTGAAGCCGACGTATTCCACAAGCCACCTCCCAAACGACACCTTCATCCTCCTGGGAGATGATCGTCGTCCTCTGTATATAGCTGTATAAAGGGAGATATTGGCCGTTTTTGAAATAGGAGGCATGGTGACTCTCAACATGgaatgagat
>TU1950651
TACTGACAACCTGTTGAgttgtcctcctctccatcaAAGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctctctccatcaaaGCTATGAGACTCTACTGACAACCTGTTGAgttgtcctcctcCTCTCCATCAAAGCGTTGTTGCCTGTTATGGTTTACTTCTATTTGTATTACTTTACTGTAAGCCGTTTCGAACCCCGTATCTGTCCTTGCCTGAAGCCGACGTATTCCACAAGCCACCTCCCAAACGACACCTTCATCCTCCTGGGAGATGATCGTCGTCCTCTGTATATAGCTGTATAAAGGGAGATATTGGCCGTTTTTGAAATAGGAGGCATGGTGACTCTCAACATGgaatgagat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1950660 False 2069 lncRNA 0.46 2 6305553 6308221
TU1950649 False 692 lncRNA 0.46 2 6307234 6308221
TU1950652 False 794 lncRNA 0.46 3 6307234 6308221
TU1950653 False 887 lncRNA 0.46 2 6307234 6308221
TU1950654 False 694 lncRNA 0.46 3 6307234 6308221
TU1950655 False 793 lncRNA 0.46 2 6307234 6308221
TU1950656 False 894 lncRNA 0.46 2 6307234 6308221
TU1950657 False 740 lncRNA 0.46 2 6307234 6308221
TU1950658 False 644 lncRNA 0.45 3 6307234 6308221
TU1950659 False 541 lncRNA 0.45 3 6307234 6308221
TU1950651 True 371 lncRNA 0.46 2 6307802 6308221

Neighbor

gene id symbol gene type direction distance location
LOC110500907 braf coding upstream 1232 6259813 ~ 6304321 (+)
mrps33 mrps33 coding upstream 53220 6228081 ~ 6252333 (+)
LOC110527635 LOC106590880 coding upstream 311763 5986775 ~ 5993790 (+)
LOC118942842 LOC106575061 coding upstream 318912 5979351 ~ 5986641 (+)
LOC118936346 dera coding upstream 426262 5865290 ~ 5879297 (+)
LOC118942844 large1 coding downstream 404699 6712920 ~ 6879730 (+)
LOC118942849 arhgap8 coding downstream 1219306 7527527 ~ 7561975 (+)
LOC118942991 NA coding downstream 1253123 7561344 ~ 7574758 (+)
LOC110510398 LOC106591976 coding downstream 1492445 7800666 ~ 7829915 (+)
LOC118942850 NA coding downstream 1495059 7803280 ~ 7805680 (+)
G1703836 NA non-coding upstream 6231 6297814 ~ 6299322 (+)
G1703835 NA non-coding upstream 15239 6289886 ~ 6290314 (+)
G1703827 NA non-coding upstream 33284 6271753 ~ 6272269 (+)
G1703820 NA non-coding upstream 48984 6255912 ~ 6256569 (+)
G1703799 NA non-coding upstream 51626 6253394 ~ 6253927 (+)
G1703838 NA non-coding downstream 374 6308595 ~ 6310383 (+)
G1703849 NA non-coding downstream 28697 6336918 ~ 6339074 (+)
G1703893 NA non-coding downstream 34110 6342331 ~ 6342625 (+)
G1703894 NA non-coding downstream 34653 6342874 ~ 6343182 (+)
G1703895 NA non-coding downstream 35245 6343466 ~ 6343670 (+)
G1703427 LOC106590880 other upstream 310743 5983345 ~ 5994810 (+)
G1703391 NA other upstream 587852 5717199 ~ 5717701 (+)
LOC110511233 LOC107655547 other upstream 709125 5563222 ~ 5598052 (+)
G1702856 NA other upstream 1050668 5254165 ~ 5254885 (+)
G1703953 NA other downstream 97811 6406032 ~ 6406773 (+)
G1704232 NA other downstream 698948 7007169 ~ 7007740 (+)
G1704409 NA other downstream 841179 7149400 ~ 7149993 (+)

Expression


Co-expression Network