G1703838


Basic Information

Item Value
gene id G1703838
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 6308595 ~ 6310383 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1950697
gtatcgaccttacagtgaaatgctgaatacaacaggtgtagtagacctcacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagacctcacagtgaaatgctgaatacgacaggtgtagtagaccttacagtgaaatgctgacttacaggctctaaccaactgTGCAAAAAAAGGTATCAGGTGAACAATAGAAATAAAGAAATGAAAagtaacagtagagaggttatatacagtagagaggctatatacagtagagaggctatatacagtagagaggctatatacagtagagaggctatatacagtagagaggttatatacagtagagaggctatatacagtagagaggttatatacagtagagaggctatatacagtagaggctatatacagtagagaggctatatacagtagagaggctatatacagtagagaggctatatacagtagaggttatatacagtagagaggctatatacagtagaggctatatacagtagagaggctatatacagtagagaggctacatacagtagagaggctatatacagtagagaggctatatacagtagaggctatatacactatagaggctatatacagtagagaggctacatacagtagagaggctatatacagtagggaggctatatacagtagagaggctatatacagtagaggggctatatacagtagagaggctatatacagtagtgaggctatatacagtagagaggctacatacagtagagaggctctatacagtagagaggctctatacagtagagaggctatatacagtagagaggttatatacagtagagaggctatatacagtagagaggctacatacagtagagaggctatatacagtagagaggttatatacagtagagaggctatatacagtag

Function

NR:

description
PREDICTED: histidine-rich glycoprotein-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1950697 True 949 lncRNA 0.39 5 6308595 6310383

Neighbor

gene id symbol gene type direction distance location
LOC110500907 braf coding upstream 4274 6259813 ~ 6304321 (+)
mrps33 mrps33 coding upstream 56262 6228081 ~ 6252333 (+)
LOC110527635 LOC106590880 coding upstream 314805 5986775 ~ 5993790 (+)
LOC118942842 LOC106575061 coding upstream 321954 5979351 ~ 5986641 (+)
LOC118936346 dera coding upstream 429304 5865290 ~ 5879297 (+)
LOC118942844 large1 coding downstream 402537 6712920 ~ 6879730 (+)
LOC118942849 arhgap8 coding downstream 1217144 7527527 ~ 7561975 (+)
LOC118942991 NA coding downstream 1250961 7561344 ~ 7574758 (+)
LOC110510398 LOC106591976 coding downstream 1490283 7800666 ~ 7829915 (+)
LOC118942850 NA coding downstream 1492897 7803280 ~ 7805680 (+)
G1703813 NA non-coding upstream 374 6305553 ~ 6308221 (+)
G1703836 NA non-coding upstream 9273 6297814 ~ 6299322 (+)
G1703835 NA non-coding upstream 18281 6289886 ~ 6290314 (+)
G1703827 NA non-coding upstream 36326 6271753 ~ 6272269 (+)
G1703820 NA non-coding upstream 52026 6255912 ~ 6256569 (+)
G1703849 NA non-coding downstream 26535 6336918 ~ 6339074 (+)
G1703893 NA non-coding downstream 31948 6342331 ~ 6342625 (+)
G1703894 NA non-coding downstream 32491 6342874 ~ 6343182 (+)
G1703895 NA non-coding downstream 33083 6343466 ~ 6343670 (+)
G1703914 NA non-coding downstream 53335 6363718 ~ 6364161 (+)
G1703427 LOC106590880 other upstream 313785 5983345 ~ 5994810 (+)
G1703391 NA other upstream 590894 5717199 ~ 5717701 (+)
LOC110511233 LOC107655547 other upstream 712167 5563222 ~ 5598052 (+)
G1702856 NA other upstream 1053710 5254165 ~ 5254885 (+)
G1703953 NA other downstream 95649 6406032 ~ 6406773 (+)
G1704232 NA other downstream 696786 7007169 ~ 7007740 (+)
G1704409 NA other downstream 839017 7149400 ~ 7149993 (+)

Expression


Co-expression Network