G1703893


Basic Information

Item Value
gene id G1703893
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 6342331 ~ 6342625 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1950776
CAACTCTCTTGTTTTTATTAACTGATTTAATTAGAGGAGACCAGTTGAGACCAGAGTCTCATTTCCAATGGTGCCATGAGGATGTAACAACAAGGTGAAACTacaagggcacaaggcgagacccaaatgcaaactcaggaggcagatggttgagctccaaTATTTATTATACCAAAAGGGattaggcaaaaggcaggtcggggacaggcgagagttcatcaaccaggtcagagtccaaacagtaccagtggataggcaggctcgaggtcaggacaggtagagtggtcaggcaggc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1950776 True 295 lncRNA 0.47 1 6342331 6342625

Neighbor

gene id symbol gene type direction distance location
LOC110500907 braf coding upstream 38010 6259813 ~ 6304321 (+)
mrps33 mrps33 coding upstream 89998 6228081 ~ 6252333 (+)
LOC110527635 LOC106590880 coding upstream 348541 5986775 ~ 5993790 (+)
LOC118942842 LOC106575061 coding upstream 355690 5979351 ~ 5986641 (+)
LOC118936346 dera coding upstream 463040 5865290 ~ 5879297 (+)
LOC118942844 large1 coding downstream 370295 6712920 ~ 6879730 (+)
LOC118942849 arhgap8 coding downstream 1184902 7527527 ~ 7561975 (+)
LOC118942991 NA coding downstream 1218719 7561344 ~ 7574758 (+)
LOC110510398 LOC106591976 coding downstream 1458041 7800666 ~ 7829915 (+)
LOC118942850 NA coding downstream 1460655 7803280 ~ 7805680 (+)
G1703849 NA non-coding upstream 3257 6336918 ~ 6339074 (+)
G1703817 NA non-coding upstream 19827 6264178 ~ 6322504 (+)
G1703838 NA non-coding upstream 31948 6308595 ~ 6310383 (+)
G1703813 NA non-coding upstream 34110 6305553 ~ 6308221 (+)
G1703836 NA non-coding upstream 43009 6297814 ~ 6299322 (+)
G1703894 NA non-coding downstream 249 6342874 ~ 6343182 (+)
G1703895 NA non-coding downstream 841 6343466 ~ 6343670 (+)
G1703914 NA non-coding downstream 21093 6363718 ~ 6364161 (+)
G1703931 NA non-coding downstream 42985 6385610 ~ 6386125 (+)
G1703941 NA non-coding downstream 49676 6392301 ~ 6392503 (+)
G1703427 LOC106590880 other upstream 347521 5983345 ~ 5994810 (+)
G1703391 NA other upstream 624630 5717199 ~ 5717701 (+)
LOC110511233 LOC107655547 other upstream 745903 5563222 ~ 5598052 (+)
G1702856 NA other upstream 1087446 5254165 ~ 5254885 (+)
G1703953 NA other downstream 63407 6406032 ~ 6406773 (+)
G1704232 NA other downstream 664544 7007169 ~ 7007740 (+)
G1704409 NA other downstream 806775 7149400 ~ 7149993 (+)

Expression


Co-expression Network