G1703946


Basic Information

Item Value
gene id G1703946
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 6395763 ~ 6396159 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1950838
agactgtctcctctcccgaacatcactgtcaacggattggtgagggatgcagactgtctcctctcccgaacatcactgtcaacggatgggtgagggatgcagactgtctcctctcccgaacatcactgtcaacggattGGTGAGGGATGAAGACTGTAtcctctcccgaacatcactgtcaacggattggtgagggatgaagactgtctcctctcccgaacatcactgtcaacggattggtgagggatgcagactgtctcctctcccgaacatcactgtcaacggattggtgagggatgaagactgtctcctctcccgaacatcactgtcaacggattggtgagggatgcagactgtctcctctcccgaacatcactgtcaacggattggtgaggga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1950838 True 397 lncRNA 0.53 1 6395763 6396159

Neighbor

gene id symbol gene type direction distance location
LOC110500907 braf coding upstream 91442 6259813 ~ 6304321 (+)
mrps33 mrps33 coding upstream 143430 6228081 ~ 6252333 (+)
LOC110527635 LOC106590880 coding upstream 401973 5986775 ~ 5993790 (+)
LOC118942842 LOC106575061 coding upstream 409122 5979351 ~ 5986641 (+)
LOC118936346 dera coding upstream 516472 5865290 ~ 5879297 (+)
LOC118942844 large1 coding downstream 316761 6712920 ~ 6879730 (+)
LOC118942849 arhgap8 coding downstream 1131368 7527527 ~ 7561975 (+)
LOC118942991 NA coding downstream 1165185 7561344 ~ 7574758 (+)
LOC110510398 LOC106591976 coding downstream 1404507 7800666 ~ 7829915 (+)
LOC118942850 NA coding downstream 1407121 7803280 ~ 7805680 (+)
G1703941 NA non-coding upstream 3260 6392301 ~ 6392503 (+)
G1703931 NA non-coding upstream 9638 6385610 ~ 6386125 (+)
G1703914 NA non-coding upstream 31602 6363718 ~ 6364161 (+)
G1703895 NA non-coding upstream 52093 6343466 ~ 6343670 (+)
G1703894 NA non-coding upstream 52581 6342874 ~ 6343182 (+)
G1703954 NA non-coding downstream 10797 6406956 ~ 6407199 (+)
G1703970 NA non-coding downstream 26444 6422603 ~ 6422867 (+)
G1704019 NA non-coding downstream 125565 6521724 ~ 6523345 (+)
G1704034 NA non-coding downstream 163374 6559533 ~ 6562526 (+)
G1704046 NA non-coding downstream 180354 6576513 ~ 6576726 (+)
G1703427 LOC106590880 other upstream 400953 5983345 ~ 5994810 (+)
G1703391 NA other upstream 678062 5717199 ~ 5717701 (+)
LOC110511233 LOC107655547 other upstream 799335 5563222 ~ 5598052 (+)
G1702856 NA other upstream 1140878 5254165 ~ 5254885 (+)
G1703953 NA other downstream 9873 6406032 ~ 6406773 (+)
G1704232 NA other downstream 611010 7007169 ~ 7007740 (+)
G1704409 NA other downstream 753241 7149400 ~ 7149993 (+)

Expression


Co-expression Network