G1703952


Basic Information

Item Value
gene id G1703952
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 6403924 ~ 6404194 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1950844
ccccgccccaccttctgaaacaacagtacctccaccatcccgaggagaaaagagccagacatggcttattacagcacagctctactagaccaggcccaacacagcacagctctactagaccaggcccaacacagcacagctctactagacccggcccatcacaacacagctctactagacccggcccatcacaacacagctctactagacccggcccatcacaacacagctctactagacccggcccatcacaacacagctctactagacc

Function

NR:

description
PREDICTED: uncharacterized protein LOC106597055, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1950844 True 271 lncRNA 0.56 1 6403924 6404194

Neighbor

gene id symbol gene type direction distance location
LOC110499738 lmo3 coding downstream 215114 6067135 ~ 6188810 (-)
LOC118942843 NA coding downstream 452313 5950034 ~ 5963423 (-)
LOC118942841 NA coding downstream 581634 5687945 ~ 5822290 (-)
LOC118942840 NA coding downstream 717708 5652498 ~ 5686229 (-)
LOC110511232 wif1 coding downstream 842501 5496219 ~ 5561423 (-)
LOC118942797 NA coding upstream 113694 6517888 ~ 6518853 (-)
LOC118942845 LOC106590959 coding upstream 486329 6890523 ~ 6917536 (-)
LOC118942846 LOC105029310 coding upstream 644702 7048896 ~ 7050907 (-)
LOC118942847 LOC106593057 coding upstream 899411 7303605 ~ 7307397 (-)
LOC118942848 LOC106594098 coding upstream 976385 7379889 ~ 7384439 (-)
G1703948 NA non-coding downstream 7443 6396261 ~ 6396481 (-)
G1703947 NA non-coding downstream 7781 6395763 ~ 6396143 (-)
G1703942 NA non-coding downstream 11128 6392562 ~ 6392796 (-)
G1703936 NA non-coding downstream 15559 6388106 ~ 6388365 (-)
G1703933 NA non-coding downstream 17571 6385740 ~ 6386353 (-)
G1703957 LOC106581475 non-coding upstream 4460 6408654 ~ 6408926 (-)
G1703964 NA non-coding upstream 12226 6416420 ~ 6416892 (-)
G1703992 NA non-coding upstream 31318 6435512 ~ 6446511 (-)
G1704008 NA non-coding upstream 75969 6480163 ~ 6481054 (-)
G1704014 NA non-coding upstream 99861 6504055 ~ 6504302 (-)
G1703896 NA other downstream 60742 6342741 ~ 6343182 (-)
G1703878 NA other downstream 95704 6305553 ~ 6308220 (-)
G1703669 NA other downstream 407498 5984365 ~ 5996426 (-)
G1703658 NA other downstream 504143 5899342 ~ 5899781 (-)
G1704098 NA other upstream 296704 6700898 ~ 6705845 (-)
G1704410 NA other upstream 745371 7149565 ~ 7149979 (-)
G1704412 NA other upstream 752496 7156690 ~ 7157057 (-)
G1704702 NA other upstream 893731 7297925 ~ 7299086 (-)
G1704700 NA other upstream 895006 7299200 ~ 7301845 (-)

Expression


Co-expression Network