G1703954


Basic Information

Item Value
gene id G1703954
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 6406956 ~ 6407199 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1950846
tgtatttacaatggtgtttgttcttcactggttgcccttttcttgtggcaacaggtcacaaatcttgctgctgtgatggcacactgtggtatttcacccagtagatatgggagtttatcaaaatagaatttgttttcgaattctttgtggatctttCTTTCGAtctttcgaattctttgtggatctgtgtaatctgcaGGATccagggaaggagggggggaaggaggaggggaaggagggggag

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1950846 True 244 lncRNA 0.44 1 6406956 6407199

Neighbor

gene id symbol gene type direction distance location
LOC110500907 braf coding upstream 102635 6259813 ~ 6304321 (+)
mrps33 mrps33 coding upstream 154623 6228081 ~ 6252333 (+)
LOC110527635 LOC106590880 coding upstream 413166 5986775 ~ 5993790 (+)
LOC118942842 LOC106575061 coding upstream 420315 5979351 ~ 5986641 (+)
LOC118936346 dera coding upstream 527665 5865290 ~ 5879297 (+)
LOC118942844 large1 coding downstream 305721 6712920 ~ 6879730 (+)
LOC118942849 arhgap8 coding downstream 1120328 7527527 ~ 7561975 (+)
LOC118942991 NA coding downstream 1154145 7561344 ~ 7574758 (+)
LOC110510398 LOC106591976 coding downstream 1393467 7800666 ~ 7829915 (+)
LOC118942850 NA coding downstream 1396081 7803280 ~ 7805680 (+)
G1703946 NA non-coding upstream 10797 6395763 ~ 6396159 (+)
G1703941 NA non-coding upstream 14453 6392301 ~ 6392503 (+)
G1703931 NA non-coding upstream 20831 6385610 ~ 6386125 (+)
G1703914 NA non-coding upstream 42795 6363718 ~ 6364161 (+)
G1703895 NA non-coding upstream 63286 6343466 ~ 6343670 (+)
G1703970 NA non-coding downstream 15404 6422603 ~ 6422867 (+)
G1704019 NA non-coding downstream 114525 6521724 ~ 6523345 (+)
G1704034 NA non-coding downstream 152334 6559533 ~ 6562526 (+)
G1704046 NA non-coding downstream 169314 6576513 ~ 6576726 (+)
G1704061 NA non-coding downstream 196122 6603321 ~ 6603555 (+)
G1703953 NA other upstream 183 6406032 ~ 6406773 (+)
G1703427 LOC106590880 other upstream 412146 5983345 ~ 5994810 (+)
G1703391 NA other upstream 689255 5717199 ~ 5717701 (+)
LOC110511233 LOC107655547 other upstream 810528 5563222 ~ 5598052 (+)
G1704232 NA other downstream 599970 7007169 ~ 7007740 (+)
G1704409 NA other downstream 742201 7149400 ~ 7149993 (+)
G1704562 NA other downstream 1250230 7657429 ~ 7657869 (+)

Expression


Co-expression Network