G1704019


Basic Information

Item Value
gene id G1704019
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 6521724 ~ 6523345 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1950924
GTAACAACGTTCTATAGAATCTCATCAGATCTTTACAGTTTAGCAGGAACAACATTCTATAGAATCTCATCAGATCTTTACAGTTTAGCAGGAACAACATTCTATAGAATCTCATCAGATCTTTACAGTTCAGAACAAgcagtaacaacattctatagaatctcatcagatctttacagttcagcagtaacaacATTCTATAGAATCTCATCAGATCTTTACAGTTTAGCAGGAACAACATTCTATAGAATATCATCAGATCTTTACAGTTCAGAACCAGCAGGCACAACATTCTATAGAATCTCATCAGATCTTTACAGTTTAgcagtaacaacattctatagaatCTCATCAGATCTTTACAGTTTAGCACCAGtagtaacaacattctatagaatctcatcagatctttacagttcagcagtaacaacattctatagaatctcatcagatctttacagttcagcagtaacaacattctatagaatCTCATCAGATCTTTACAGTTCAGAACCAgcagtaacaacattctatagaatCTCATCAGATCTTTACAGTTCAGCAGTAACAACATCCTATAGAATCTCATCAGATCTTTACAGTTTAGCACCAgcagtaacaacattctatagaatctcatcagatctttacagtttagcagtaacaacATTCTATAGAATCTCATCAGATCTTTACAGTTTAgcagtaacaacattctatagaatCTCATCAGATCTTTACAGTTTAGCACCAGCAGTAACAACATTCTATTGAATCTATACATTAGCATTGGTCCAGTAGCAACAATGAAtatgtgtctgactgactgaacacTGGTTATAAACCCCTACCACCTCATGGATTAGCTGCCTGCCTCTTCTGCTCCCCTACTTGACATAGATACTTTGTGTTTATTGATATGT

Function

NR:

description
PREDICTED: mucin-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1950924 True 923 lncRNA 0.35 4 6521724 6523345

Neighbor

gene id symbol gene type direction distance location
LOC110500907 braf coding upstream 217403 6259813 ~ 6304321 (+)
mrps33 mrps33 coding upstream 269391 6228081 ~ 6252333 (+)
LOC110527635 LOC106590880 coding upstream 527934 5986775 ~ 5993790 (+)
LOC118942842 LOC106575061 coding upstream 535083 5979351 ~ 5986641 (+)
LOC118936346 dera coding upstream 642433 5865290 ~ 5879297 (+)
LOC118942844 large1 coding downstream 189575 6712920 ~ 6879730 (+)
LOC118942849 arhgap8 coding downstream 1004182 7527527 ~ 7561975 (+)
LOC118942991 NA coding downstream 1037999 7561344 ~ 7574758 (+)
LOC110510398 LOC106591976 coding downstream 1277321 7800666 ~ 7829915 (+)
LOC118942850 NA coding downstream 1279935 7803280 ~ 7805680 (+)
G1703970 NA non-coding upstream 98857 6422603 ~ 6422867 (+)
G1703954 NA non-coding upstream 114525 6406956 ~ 6407199 (+)
G1703946 NA non-coding upstream 125565 6395763 ~ 6396159 (+)
G1703941 NA non-coding upstream 129221 6392301 ~ 6392503 (+)
G1703931 NA non-coding upstream 135599 6385610 ~ 6386125 (+)
G1704034 NA non-coding downstream 36188 6559533 ~ 6562526 (+)
G1704046 NA non-coding downstream 53168 6576513 ~ 6576726 (+)
G1704061 NA non-coding downstream 79976 6603321 ~ 6603555 (+)
G1704075 NA non-coding downstream 109738 6633083 ~ 6634024 (+)
G1704085 NA non-coding downstream 120856 6644201 ~ 6645201 (+)
G1703953 NA other upstream 114951 6406032 ~ 6406773 (+)
G1703427 LOC106590880 other upstream 526914 5983345 ~ 5994810 (+)
G1703391 NA other upstream 804023 5717199 ~ 5717701 (+)
LOC110511233 LOC107655547 other upstream 925296 5563222 ~ 5598052 (+)
G1704232 NA other downstream 483824 7007169 ~ 7007740 (+)
G1704409 NA other downstream 626055 7149400 ~ 7149993 (+)
G1704562 NA other downstream 1134084 7657429 ~ 7657869 (+)

Expression


Co-expression Network