G1704034


Basic Information

Item Value
gene id G1704034
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 6559533 ~ 6562526 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1950952
gtctatttctatgtctggcctgatatggttctcaatcagaggcaggtgttagtcattgtctctgattgggaaccatatttaggtagcctgggtttcactgtgtgtttgtgggtgattgttcctgtctatgtgttttcaccagatagggctgtttaggttttcgttacgttcatcacgttctttattttgtagtgtttgtactgattcgtgttttac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1950952 True 216 lncRNA 0.41 2 6559533 6562526

Neighbor

gene id symbol gene type direction distance location
LOC110500907 braf coding upstream 255212 6259813 ~ 6304321 (+)
mrps33 mrps33 coding upstream 307200 6228081 ~ 6252333 (+)
LOC110527635 LOC106590880 coding upstream 565743 5986775 ~ 5993790 (+)
LOC118942842 LOC106575061 coding upstream 572892 5979351 ~ 5986641 (+)
LOC118936346 dera coding upstream 680242 5865290 ~ 5879297 (+)
LOC118942844 large1 coding downstream 150394 6712920 ~ 6879730 (+)
LOC118942849 arhgap8 coding downstream 965001 7527527 ~ 7561975 (+)
LOC118942991 NA coding downstream 998818 7561344 ~ 7574758 (+)
LOC110510398 LOC106591976 coding downstream 1238140 7800666 ~ 7829915 (+)
LOC118942850 NA coding downstream 1240754 7803280 ~ 7805680 (+)
G1704019 NA non-coding upstream 36188 6521724 ~ 6523345 (+)
G1703970 NA non-coding upstream 136666 6422603 ~ 6422867 (+)
G1703954 NA non-coding upstream 152334 6406956 ~ 6407199 (+)
G1703946 NA non-coding upstream 163374 6395763 ~ 6396159 (+)
G1703941 NA non-coding upstream 167030 6392301 ~ 6392503 (+)
G1704046 NA non-coding downstream 13987 6576513 ~ 6576726 (+)
G1704061 NA non-coding downstream 40795 6603321 ~ 6603555 (+)
G1704075 NA non-coding downstream 70557 6633083 ~ 6634024 (+)
G1704085 NA non-coding downstream 81675 6644201 ~ 6645201 (+)
G1704086 NA non-coding downstream 83152 6645678 ~ 6649693 (+)
G1703953 NA other upstream 152760 6406032 ~ 6406773 (+)
G1703427 LOC106590880 other upstream 564723 5983345 ~ 5994810 (+)
G1703391 NA other upstream 841832 5717199 ~ 5717701 (+)
LOC110511233 LOC107655547 other upstream 963105 5563222 ~ 5598052 (+)
G1704232 NA other downstream 444643 7007169 ~ 7007740 (+)
G1704409 NA other downstream 586874 7149400 ~ 7149993 (+)
G1704562 NA other downstream 1094903 7657429 ~ 7657869 (+)

Expression


Co-expression Network