G1704060


Basic Information

Item Value
gene id G1704060
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 6601621 ~ 6603258 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1950979
gaacaaattcttatttacaatgacggccttcagaaaggcaaaaggcctccagCAGGGACTGGGGCTGGATTAAAAATAACAACATAAATAAATAGATAGGactaaacacacatcacgacaagagagacaccacaacactacgtatagacaccacaacactacgtatagacaccacaacactacatatagacaccacaacactacatatagacaccacaacactacgtatagacaccacaacactacgtatagacaccacaacactacgtctagacaccacaacactatgtATAGAcaccacatcacgacaagagagacaccacaacactacataaagagagacaccacaacactacatatagacaccacaacactacatatagacaccacaacactatatatagacaccacaacactacgtatagacaccacaacactacgtaTAGACaccacatcacaacaagagagacaccacatcacgacaagagagacaccacaacactacgtatagacaccacaacactacgtatagacaccacaacactacgtaTAGACaccacaacactacgtaTAGACaccacatcacaacaagagagacaccacaacactacgtaTAGAcaccacatcacgacaagagagacaccacagcactacatatagacaccacaacaATACGTATagacacacaacactacataaagacactacaccactacataaagagagacactacataaagagagatactacaacactacatagagagagacaacacaacactacatagagagagacaacacaacactacatagagagagacaacacaacactacatagagagagacaacacaacactacataaagagagacaccacaacactacataaagagagacaccacaacactacataaagagagacaccacaacactacatatagacaccacaacactacatatagacaccacaacactacatatagacaccacaacactacataaagacaccacaacactacataaagagagacaccacaacactacgtatagacaccacaacactacgtatagacaccacaacactacataaagacaccacaacactacatatagacaccacaacactatatatagacaccacaacactacataaagagagacaccacaacactacatatagacaccacaacactacataaagagagacaccacaacactacatatagacaccacaacactatttATAGACACCACAACGCTAtatatagacaccacaacactacatatagacaccacaacactatatatagacaccacaacactatatatagacaccacaacactacatataaacaccacaacactacataaagagagacaccacaacactacatatagacaccacaacactacataaagagagacaccacaacactacatatagacaccacaacactatatatagaaaccacaacactacataaagagagacaccacaacactacatatagacaccacaacactacatatagacaccacaacactacataaaga

Function

NR:

description
PREDICTED: uncharacterized protein LOC106933171

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1950979 True 1552 lncRNA 0.40 2 6601621 6603258

Neighbor

gene id symbol gene type direction distance location
LOC118942797 NA coding downstream 83275 6517888 ~ 6518853 (-)
LOC110499738 lmo3 coding downstream 412811 6067135 ~ 6188810 (-)
LOC118942843 NA coding downstream 650010 5950034 ~ 5963423 (-)
LOC118942841 NA coding downstream 779331 5687945 ~ 5822290 (-)
LOC118942840 NA coding downstream 915405 5652498 ~ 5686229 (-)
LOC118942845 LOC106590959 coding upstream 287265 6890523 ~ 6917536 (-)
LOC118942846 LOC105029310 coding upstream 445638 7048896 ~ 7050907 (-)
LOC118942847 LOC106593057 coding upstream 700347 7303605 ~ 7307397 (-)
LOC118942848 LOC106594098 coding upstream 777321 7379889 ~ 7384439 (-)
LOC118936572 LOC108250668 coding upstream 987270 7585971 ~ 7768303 (-)
G1704058 NA non-coding downstream 3555 6596306 ~ 6598066 (-)
G1704055 NA non-coding downstream 10872 6590065 ~ 6590749 (-)
G1704045 NA non-coding downstream 28078 6573303 ~ 6573543 (-)
G1704041 NA non-coding downstream 32317 6568939 ~ 6569304 (-)
G1704035 NA non-coding downstream 38845 6559337 ~ 6562776 (-)
G1704062 NA non-coding upstream 1468 6604726 ~ 6605067 (-)
G1704080 NA non-coding upstream 32266 6635524 ~ 6635904 (-)
G1704081 NA non-coding upstream 37775 6641033 ~ 6641712 (-)
G1704097 NA non-coding upstream 51229 6654487 ~ 6702083 (-)
G1704250 NA non-coding upstream 142518 6745776 ~ 6746402 (-)
G1703896 NA other downstream 258439 6342741 ~ 6343182 (-)
G1703878 NA other downstream 293401 6305553 ~ 6308220 (-)
G1703669 NA other downstream 605195 5984365 ~ 5996426 (-)
G1703658 NA other downstream 701840 5899342 ~ 5899781 (-)
G1704098 NA other upstream 97640 6700898 ~ 6705845 (-)
G1704410 NA other upstream 546307 7149565 ~ 7149979 (-)
G1704412 NA other upstream 553432 7156690 ~ 7157057 (-)
G1704702 NA other upstream 694667 7297925 ~ 7299086 (-)
G1704700 NA other upstream 695942 7299200 ~ 7301845 (-)

Expression


Co-expression Network