G1704088


Basic Information

Item Value
gene id G1704088
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 6659022 ~ 6660745 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1951018
acaataaaaccctgatgaagaccaggcagtggtggtatagagtctgacaacaataaaaccctgatgaagacaataaaaccctgatgaagaccagacagtggtggtatagagtctgacaacaatacaaccctgatgaagaccaggcagtggtggtatagagtctgacaacaataaaaccctgatgaagaccagacagtggtggtatagagtctgacaacaataaaaccctgatgaagaccagacagtggtggtatagagtctgacaacaataaaaccctgatgaagacaataaaaccctgatgaagaccaggcagtggtggtatagagtctgacaacaataaaaccctgatgaagacaataaaaccctgatgaagaccaggcagtgatggtatagagtctgacaacaataaaaccctgatgaagacaataaaaccctgatgaagacaataaaaccctgatgaagaccagacagtggtggtatagagtctgacaacaataaaaccctgatgaagaccatgcagtggtggtatagagtctgacaacaataaaaccctgatgaagaccagacagtggtggtatagagtctgacaacaataaaaccctgatgaagaccagacagtggtggtatagagtctgacaacaataaaaccctgatgaagacaataaaaccctgatgaagaccaggcagtggtggtatagagtctgacaacaataaaaccctgatgaagacaataaaaccctgatga

Function

NR:

description
PREDICTED: histidine-rich glycoprotein-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1951018 True 746 lncRNA 0.42 2 6659022 6660745

Neighbor

gene id symbol gene type direction distance location
LOC110500907 braf coding upstream 354701 6259813 ~ 6304321 (+)
mrps33 mrps33 coding upstream 406689 6228081 ~ 6252333 (+)
LOC110527635 LOC106590880 coding upstream 665232 5986775 ~ 5993790 (+)
LOC118942842 LOC106575061 coding upstream 672381 5979351 ~ 5986641 (+)
LOC118936346 dera coding upstream 779731 5865290 ~ 5879297 (+)
LOC118942844 large1 coding downstream 52175 6712920 ~ 6879730 (+)
LOC118942849 arhgap8 coding downstream 866782 7527527 ~ 7561975 (+)
LOC118942991 NA coding downstream 900599 7561344 ~ 7574758 (+)
LOC110510398 LOC106591976 coding downstream 1139921 7800666 ~ 7829915 (+)
LOC118942850 NA coding downstream 1142535 7803280 ~ 7805680 (+)
G1704086 NA non-coding upstream 9329 6645678 ~ 6649693 (+)
G1704085 NA non-coding upstream 13821 6644201 ~ 6645201 (+)
G1704075 NA non-coding upstream 24998 6633083 ~ 6634024 (+)
G1704061 NA non-coding upstream 55467 6603321 ~ 6603555 (+)
G1704046 NA non-coding upstream 82296 6576513 ~ 6576726 (+)
G1704102 NA non-coding downstream 46632 6707377 ~ 6707659 (+)
G1704108 NA non-coding downstream 57402 6718147 ~ 6718483 (+)
G1704128 NA non-coding downstream 78424 6739169 ~ 6739486 (+)
G1704140 NA non-coding downstream 104731 6765476 ~ 6766880 (+)
G1704145 NA non-coding downstream 113075 6773820 ~ 6774381 (+)
G1703953 NA other upstream 252249 6406032 ~ 6406773 (+)
G1703427 LOC106590880 other upstream 664212 5983345 ~ 5994810 (+)
G1703391 NA other upstream 941321 5717199 ~ 5717701 (+)
LOC110511233 LOC107655547 other upstream 1062594 5563222 ~ 5598052 (+)
G1704232 NA other downstream 346424 7007169 ~ 7007740 (+)
G1704409 NA other downstream 488655 7149400 ~ 7149993 (+)
G1704562 NA other downstream 996684 7657429 ~ 7657869 (+)

Expression


Co-expression Network