G1704108


Basic Information

Item Value
gene id G1704108
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 6718147 ~ 6718483 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1951048
tcctggctgaactgcctgtctgtgttGTTCAGTTAGACAGGAGGTAATGTAGTAGTTGAACAAGGACACTGTTAGACAGGAGGTAATTTAGTAGTTTAACAAGGAGACAATGTTAGACAGGAGGTAATGTAGTAGTTGAACAAGGAGACACTGTGAGACAGGAGGTAATGTAGTAGTTGAACAAGGAGACACTGTTTGACAGGAGGTAATGTAGTGGTTGAACAAGGAGACACTGTTTGACAGGAGGTAATGTAGTAGTTGAACAAGGAGACACTGTATAACGCATAATTATAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1951048 True 296 lncRNA 0.41 2 6718147 6718483

Neighbor

gene id symbol gene type direction distance location
LOC110500907 braf coding upstream 413826 6259813 ~ 6304321 (+)
mrps33 mrps33 coding upstream 465814 6228081 ~ 6252333 (+)
LOC110527635 LOC106590880 coding upstream 724357 5986775 ~ 5993790 (+)
LOC118942842 LOC106575061 coding upstream 731506 5979351 ~ 5986641 (+)
LOC118936346 dera coding upstream 838856 5865290 ~ 5879297 (+)
LOC118942849 arhgap8 coding downstream 809044 7527527 ~ 7561975 (+)
LOC118942991 NA coding downstream 842861 7561344 ~ 7574758 (+)
LOC110510398 LOC106591976 coding downstream 1082183 7800666 ~ 7829915 (+)
LOC118942850 NA coding downstream 1084797 7803280 ~ 7805680 (+)
LOC118936573 LOC105026518 coding downstream 1155132 7873615 ~ 7878590 (+)
G1704102 NA non-coding upstream 10488 6707377 ~ 6707659 (+)
G1704087 NA non-coding upstream 16980 6655412 ~ 6701167 (+)
G1704088 NA non-coding upstream 57402 6659022 ~ 6660745 (+)
G1704086 NA non-coding upstream 68454 6645678 ~ 6649693 (+)
G1704085 NA non-coding upstream 72946 6644201 ~ 6645201 (+)
G1704128 NA non-coding downstream 20686 6739169 ~ 6739486 (+)
G1704140 NA non-coding downstream 46993 6765476 ~ 6766880 (+)
G1704145 NA non-coding downstream 55337 6773820 ~ 6774381 (+)
G1704150 NA non-coding downstream 76027 6794510 ~ 6794723 (+)
G1704155 NA non-coding downstream 87169 6805652 ~ 6805910 (+)
G1703953 NA other upstream 311374 6406032 ~ 6406773 (+)
G1703427 LOC106590880 other upstream 723337 5983345 ~ 5994810 (+)
G1703391 NA other upstream 1000446 5717199 ~ 5717701 (+)
LOC110511233 LOC107655547 other upstream 1121719 5563222 ~ 5598052 (+)
LOC118942844 large1 other downstream 84736 6712920 ~ 6879730 (+)
G1704232 NA other downstream 288686 7007169 ~ 7007740 (+)
G1704409 NA other downstream 430917 7149400 ~ 7149993 (+)
G1704562 NA other downstream 938946 7657429 ~ 7657869 (+)

Expression


Co-expression Network