G1704150


Basic Information

Item Value
gene id G1704150
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 6794510 ~ 6794723 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1951098
taagaacagaatacatttctaaacacttctacctTAACTACAGGATGGGTGTCCCTAAACCGGTGCGGTTGTTGCTAACGTCACTAGAATGACGTTGTaaacaacagccaactttccgggacatagacatgtctcatacgggcagaaagcttaacattcttgttaatctaactgcactgtccaatttacagtagctattacagtgaacaaATAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1951098 True 214 lncRNA 0.40 1 6794510 6794723

Neighbor

gene id symbol gene type direction distance location
LOC110500907 braf coding upstream 490189 6259813 ~ 6304321 (+)
mrps33 mrps33 coding upstream 542177 6228081 ~ 6252333 (+)
LOC110527635 LOC106590880 coding upstream 800720 5986775 ~ 5993790 (+)
LOC118942842 LOC106575061 coding upstream 807869 5979351 ~ 5986641 (+)
LOC118936346 dera coding upstream 915219 5865290 ~ 5879297 (+)
LOC118942849 arhgap8 coding downstream 732804 7527527 ~ 7561975 (+)
LOC118942991 NA coding downstream 766621 7561344 ~ 7574758 (+)
LOC110510398 LOC106591976 coding downstream 1005943 7800666 ~ 7829915 (+)
LOC118942850 NA coding downstream 1008557 7803280 ~ 7805680 (+)
LOC118936573 LOC105026518 coding downstream 1078892 7873615 ~ 7878590 (+)
G1704145 NA non-coding upstream 20129 6773820 ~ 6774381 (+)
G1704140 NA non-coding upstream 27630 6765476 ~ 6766880 (+)
G1704128 NA non-coding upstream 55024 6739169 ~ 6739486 (+)
G1704108 NA non-coding upstream 76027 6718147 ~ 6718483 (+)
G1704102 NA non-coding upstream 86851 6707377 ~ 6707659 (+)
G1704155 NA non-coding downstream 10929 6805652 ~ 6805910 (+)
G1704156 NA non-coding downstream 12984 6807707 ~ 6807935 (+)
G1704157 NA non-coding downstream 20804 6815527 ~ 6815929 (+)
G1704159 NA non-coding downstream 28258 6822981 ~ 6823206 (+)
LOC118942844 large1 non-coding downstream 31644 6712920 ~ 6879730 (+)
G1703953 NA other upstream 387737 6406032 ~ 6406773 (+)
G1703427 LOC106590880 other upstream 799700 5983345 ~ 5994810 (+)
G1703391 NA other upstream 1076809 5717199 ~ 5717701 (+)
LOC110511233 LOC107655547 other upstream 1198082 5563222 ~ 5598052 (+)
G1704232 NA other downstream 212446 7007169 ~ 7007740 (+)
G1704409 NA other downstream 354677 7149400 ~ 7149993 (+)
G1704562 NA other downstream 862706 7657429 ~ 7657869 (+)

Expression


Co-expression Network