G1704157


Basic Information

Item Value
gene id G1704157
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 6815527 ~ 6815929 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1951106
GTTTAGATGGTTTCTgggaacaagtgaaggaagctgtagatggtggacatggtggtggtttctgggaacaagtgaaggaagctgtagatggaggacatggtggtggtttctgtgaacaagtgaaggaagctgtagatggtggtggtttctgggaacaagtgaaggaagctgtagatggaggacatggtggtggtttctgtgaacaagtgaaggaagctgtagatggtggtggtttctgggaacaagtgaaggaagctgtagatggtggacatggtggtggtttctgggaacaagtgaaggaagctgtagatggaggacatggtggtggtttctgtgaacaagtgaaggaagctgtagatggtggcggtttctgggaacaagtgaaggaagctgtagatggtgg

Function

NR:

description
PREDICTED: uncharacterized protein LOC106568286

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1951106 True 403 lncRNA 0.49 1 6815527 6815929

Neighbor

gene id symbol gene type direction distance location
LOC110500907 braf coding upstream 511206 6259813 ~ 6304321 (+)
mrps33 mrps33 coding upstream 563194 6228081 ~ 6252333 (+)
LOC110527635 LOC106590880 coding upstream 821737 5986775 ~ 5993790 (+)
LOC118942842 LOC106575061 coding upstream 828886 5979351 ~ 5986641 (+)
LOC118936346 dera coding upstream 936236 5865290 ~ 5879297 (+)
LOC118942849 arhgap8 coding downstream 711598 7527527 ~ 7561975 (+)
LOC118942991 NA coding downstream 745415 7561344 ~ 7574758 (+)
LOC110510398 LOC106591976 coding downstream 984737 7800666 ~ 7829915 (+)
LOC118942850 NA coding downstream 987351 7803280 ~ 7805680 (+)
LOC118936573 LOC105026518 coding downstream 1057686 7873615 ~ 7878590 (+)
G1704156 NA non-coding upstream 7592 6807707 ~ 6807935 (+)
G1704155 NA non-coding upstream 9617 6805652 ~ 6805910 (+)
G1704150 NA non-coding upstream 20804 6794510 ~ 6794723 (+)
G1704145 NA non-coding upstream 41146 6773820 ~ 6774381 (+)
G1704140 NA non-coding upstream 48647 6765476 ~ 6766880 (+)
G1704159 NA non-coding downstream 7052 6822981 ~ 6823206 (+)
LOC118942844 large1 non-coding downstream 10438 6712920 ~ 6879730 (+)
G1704162 NA non-coding downstream 10629 6826558 ~ 6827097 (+)
G1704164 NA non-coding downstream 22807 6838736 ~ 6839127 (+)
G1704168 NA non-coding downstream 34374 6850303 ~ 6909159 (+)
G1703953 NA other upstream 408754 6406032 ~ 6406773 (+)
G1703427 LOC106590880 other upstream 820717 5983345 ~ 5994810 (+)
G1703391 NA other upstream 1097826 5717199 ~ 5717701 (+)
G1704232 NA other downstream 191240 7007169 ~ 7007740 (+)
G1704409 NA other downstream 333471 7149400 ~ 7149993 (+)
G1704562 NA other downstream 841500 7657429 ~ 7657869 (+)
G1704651 NA other downstream 1033631 7849560 ~ 7850120 (+)

Expression


Co-expression Network