G1704176


Basic Information

Item Value
gene id G1704176
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 6867935 ~ 6868780 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1951127
TTACCCTGTAGCTCTGTCAGGTAGCTCTGTGAGCTGAAGACCACATGGGAGTCTTTACCCTGTAGCCCTGTCAGTTAGCTCTGGGGGCTGAAAACCACATGCCATCCTGCTGATATTAGCCTCCAGTCATCCATCCTATTGATTTGGAACACATGGAACACTGAGGCCCGTATGGACCCTTTCTAGAACACAGGGAACACTGAGGTCCATATAGacccattctagaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1951127 True 228 lncRNA 0.50 3 6867935 6868780

Neighbor

gene id symbol gene type direction distance location
LOC110500907 braf coding upstream 563614 6259813 ~ 6304321 (+)
mrps33 mrps33 coding upstream 615602 6228081 ~ 6252333 (+)
LOC110527635 LOC106590880 coding upstream 874145 5986775 ~ 5993790 (+)
LOC118942842 LOC106575061 coding upstream 881294 5979351 ~ 5986641 (+)
LOC118936346 dera coding upstream 988644 5865290 ~ 5879297 (+)
LOC118942849 arhgap8 coding downstream 658747 7527527 ~ 7561975 (+)
LOC118942991 NA coding downstream 692564 7561344 ~ 7574758 (+)
LOC110510398 LOC106591976 coding downstream 931886 7800666 ~ 7829915 (+)
LOC118942850 NA coding downstream 934500 7803280 ~ 7805680 (+)
LOC118936573 LOC105026518 coding downstream 1004835 7873615 ~ 7878590 (+)
G1704164 NA non-coding upstream 28808 6838736 ~ 6839127 (+)
LOC118942844 large1 non-coding upstream 32856 6712920 ~ 6879730 (+)
G1704162 NA non-coding upstream 40838 6826558 ~ 6827097 (+)
G1704159 NA non-coding upstream 44729 6822981 ~ 6823206 (+)
G1704157 NA non-coding upstream 52006 6815527 ~ 6815929 (+)
G1704177 NA non-coding downstream 5104 6873884 ~ 6874422 (+)
G1704178 NA non-coding downstream 12453 6881233 ~ 6937400 (+)
G1704183 NA non-coding downstream 21915 6890695 ~ 6891610 (+)
G1704194 NA non-coding downstream 40468 6909248 ~ 6909558 (+)
G1704195 NA non-coding downstream 41170 6909950 ~ 6910336 (+)
G1703953 NA other upstream 461162 6406032 ~ 6406773 (+)
G1703427 LOC106590880 other upstream 873125 5983345 ~ 5994810 (+)
G1703391 NA other upstream 1150234 5717199 ~ 5717701 (+)
G1704232 NA other downstream 138389 7007169 ~ 7007740 (+)
G1704409 NA other downstream 280620 7149400 ~ 7149993 (+)
G1704562 NA other downstream 788649 7657429 ~ 7657869 (+)
G1704651 NA other downstream 980780 7849560 ~ 7850120 (+)

Expression


Co-expression Network