G1704177


Basic Information

Item Value
gene id G1704177
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 6873884 ~ 6874422 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1951128
CACTGGGCCAGTGTTCTGAACTTAAAGGGATGGGACGCTGGGCCAGTGTTCTGAACTTAAAGGGATGGCCCACTGGGCCAGTGTTCTGACCTTAAAGGGATGGGACACATTCTCATTAGTTAGCAGCAGCACAGATGTTACTCTACCAATCGCCTGCCAACGACTGAAACGATCATTTAAGGTACAACATCAATCTGACTCCGACTCTAAGGGATAAAGggatg

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1951128 True 224 lncRNA 0.49 2 6873884 6874422

Neighbor

gene id symbol gene type direction distance location
LOC110500907 braf coding upstream 569563 6259813 ~ 6304321 (+)
mrps33 mrps33 coding upstream 621551 6228081 ~ 6252333 (+)
LOC110527635 LOC106590880 coding upstream 880094 5986775 ~ 5993790 (+)
LOC118942842 LOC106575061 coding upstream 887243 5979351 ~ 5986641 (+)
LOC118936346 dera coding upstream 994593 5865290 ~ 5879297 (+)
LOC118942849 arhgap8 coding downstream 653105 7527527 ~ 7561975 (+)
LOC118942991 NA coding downstream 686922 7561344 ~ 7574758 (+)
LOC110510398 LOC106591976 coding downstream 926244 7800666 ~ 7829915 (+)
LOC118942850 NA coding downstream 928858 7803280 ~ 7805680 (+)
LOC118936573 LOC105026518 coding downstream 999193 7873615 ~ 7878590 (+)
G1704176 NA non-coding upstream 5104 6867935 ~ 6868780 (+)
G1704164 NA non-coding upstream 34757 6838736 ~ 6839127 (+)
LOC118942844 large1 non-coding upstream 38805 6712920 ~ 6879730 (+)
G1704162 NA non-coding upstream 46787 6826558 ~ 6827097 (+)
G1704159 NA non-coding upstream 50678 6822981 ~ 6823206 (+)
G1704178 NA non-coding downstream 6811 6881233 ~ 6937400 (+)
G1704183 NA non-coding downstream 16273 6890695 ~ 6891610 (+)
G1704194 NA non-coding downstream 34826 6909248 ~ 6909558 (+)
G1704195 NA non-coding downstream 35528 6909950 ~ 6910336 (+)
G1704203 NA non-coding downstream 49694 6924116 ~ 6924914 (+)
G1703953 NA other upstream 467111 6406032 ~ 6406773 (+)
G1703427 LOC106590880 other upstream 879074 5983345 ~ 5994810 (+)
G1703391 NA other upstream 1156183 5717199 ~ 5717701 (+)
G1704232 NA other downstream 132747 7007169 ~ 7007740 (+)
G1704409 NA other downstream 274978 7149400 ~ 7149993 (+)
G1704562 NA other downstream 783007 7657429 ~ 7657869 (+)
G1704651 NA other downstream 975138 7849560 ~ 7850120 (+)

Expression


Co-expression Network