G1704178


Basic Information

Item Value
gene id G1704178
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 6881233 ~ 6937400 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1951130
ctccctccctccctccctccctccctccctccctccctccctccttagcgaggacagaggagagtgaacagagaGCTTTGAAGCAGTGTGTGCTTTACATTATGTCCGTACACTGCAAATCagaaatattatttttttctctccatgtgccgtaaaaaataaaacaatttaactGACAGACAACGTATCCAAGTTTCACTCTCATAAAAATGCAAATGATGTTGCTCAGGGATAAGAGACAAAAACATCAGAGCCTCAACAGAATCAGAAACGTCGGAGAGTCTGGATGACTGACACATGGCTGAGTCCCaaattctctatatagtacactactaaagaccagagccctattccctatatagtacactactaaagaccagagccctattccctatatagtgcactactttagaccagagccctattccctatatagtacactactatagaccagagccctattccctatatagtacactactatagaccagagccctattccctatatagtgcactactttagaccagagccctattccctatatagtgcactacattagaccagagccctattccctatatagtgcactactttagaccagagccctattccctatatagtgcactactatagaccagggccctattccctatatagtgcactactatagaaca

Function

NR:

description
PREDICTED: uncharacterized protein LOC106562210, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1951130 True 675 lncRNA 0.43 2 6881233 6937400

Neighbor

gene id symbol gene type direction distance location
LOC118942844 large1 coding upstream 1503 6712920 ~ 6879730 (+)
LOC110500907 braf coding upstream 576912 6259813 ~ 6304321 (+)
mrps33 mrps33 coding upstream 628900 6228081 ~ 6252333 (+)
LOC110527635 LOC106590880 coding upstream 887443 5986775 ~ 5993790 (+)
LOC118942842 LOC106575061 coding upstream 894592 5979351 ~ 5986641 (+)
LOC118942849 arhgap8 coding downstream 590127 7527527 ~ 7561975 (+)
LOC118942991 NA coding downstream 623944 7561344 ~ 7574758 (+)
LOC110510398 LOC106591976 coding downstream 863266 7800666 ~ 7829915 (+)
LOC118942850 NA coding downstream 865880 7803280 ~ 7805680 (+)
LOC118936573 LOC105026518 coding downstream 936215 7873615 ~ 7878590 (+)
G1704177 NA non-coding upstream 6811 6873884 ~ 6874422 (+)
G1704176 NA non-coding upstream 12453 6867935 ~ 6868780 (+)
G1704164 NA non-coding upstream 42106 6838736 ~ 6839127 (+)
G1704162 NA non-coding upstream 54136 6826558 ~ 6827097 (+)
G1704212 NA non-coding downstream 3728 6941128 ~ 6941339 (+)
G1704219 NA non-coding downstream 39800 6977200 ~ 6977415 (+)
G1704221 NA non-coding downstream 42072 6979472 ~ 6979974 (+)
G1704222 NA non-coding downstream 45464 6982864 ~ 6983154 (+)
G1704226 NA non-coding downstream 59772 6997172 ~ 6997379 (+)
G1703953 NA other upstream 474460 6406032 ~ 6406773 (+)
G1703427 LOC106590880 other upstream 886423 5983345 ~ 5994810 (+)
G1703391 NA other upstream 1163532 5717199 ~ 5717701 (+)
G1704232 NA other downstream 69769 7007169 ~ 7007740 (+)
G1704409 NA other downstream 212000 7149400 ~ 7149993 (+)
G1704562 NA other downstream 720029 7657429 ~ 7657869 (+)
G1704651 NA other downstream 912160 7849560 ~ 7850120 (+)

Expression


Co-expression Network