G1704183


Basic Information

Item Value
gene id G1704183
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 6890695 ~ 6891610 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1951135
GGTTTAATACACAGAGAAAGACTGGCTGGACTCAATGCTGATTCTTAATGGGTTAAAACGGCTGAACAATGATCATCGAATACAAACGGATGAATGATTTGCCTCAGAACCAGATTATAAAACAGcacatagaaacatgaatgtcAGATTATAAAACATGTCTGTAACTATAAACGAGTGGAAAAGCtgaacatttataaaaacaaatcccGAAACGTGATCATTTATCAAGTCCATAACAAAGCAACACAATGTGTCTTTCATGTCAACAGGAACAAACACTTGTACAACGAATAGGTGTTCACATGACAGGAAGTTGGTGAACAGGTTCATTGAGGAGAACAGGCTTGTGGGTAATGACTGGAGCTGAATCAGTGGAACGGTATTAAATATATCAAACacattctgattggtcccagaaacaggaagttggttaacaggttaattggggagaacggtattaaatatatcaaacacattctaactgttctgattggtcccagaaacagGAAGTTGGTGAACAGGCTTGTGGGTAATGACAGGAGCGGAATCGGTGGAacggtattaaatacatcacacatggtttccatggtgttTAATGTCATTCCGTTTGCTTCGTTTCCGGACATTTCTATGAGCCGTCCTTccgtcagcagcctcctgtgattcaCATGTCCTCACTGTCGAAGGACTCGGAGCACTGGAGAAAGATCTCCTCGTGGTCCCTCATAGCAGACAGACACAcgtcctatacggagagagaacctgttatctggaggacagacagacagacaggtcctata

Function

NR:

description
stimulated by retinoic acid protein 8

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1951135 True 803 lncRNA 0.42 2 6890695 6891610

Neighbor

gene id symbol gene type direction distance location
LOC118942844 large1 coding upstream 10965 6712920 ~ 6879730 (+)
LOC110500907 braf coding upstream 586374 6259813 ~ 6304321 (+)
mrps33 mrps33 coding upstream 638362 6228081 ~ 6252333 (+)
LOC110527635 LOC106590880 coding upstream 896905 5986775 ~ 5993790 (+)
LOC118942842 LOC106575061 coding upstream 904054 5979351 ~ 5986641 (+)
LOC118942849 arhgap8 coding downstream 635917 7527527 ~ 7561975 (+)
LOC118942991 NA coding downstream 669734 7561344 ~ 7574758 (+)
LOC110510398 LOC106591976 coding downstream 909056 7800666 ~ 7829915 (+)
LOC118942850 NA coding downstream 911670 7803280 ~ 7805680 (+)
LOC118936573 LOC105026518 coding downstream 982005 7873615 ~ 7878590 (+)
G1704177 NA non-coding upstream 16273 6873884 ~ 6874422 (+)
G1704176 NA non-coding upstream 21915 6867935 ~ 6868780 (+)
G1704164 NA non-coding upstream 51568 6838736 ~ 6839127 (+)
G1704162 NA non-coding upstream 63598 6826558 ~ 6827097 (+)
G1704194 NA non-coding downstream 17638 6909248 ~ 6909558 (+)
G1704195 NA non-coding downstream 18340 6909950 ~ 6910336 (+)
G1704203 NA non-coding downstream 32506 6924116 ~ 6924914 (+)
G1704208 NA non-coding downstream 43235 6934845 ~ 6935287 (+)
G1704209 NA non-coding downstream 43687 6935297 ~ 6936184 (+)
G1703953 NA other upstream 483922 6406032 ~ 6406773 (+)
G1703427 LOC106590880 other upstream 895885 5983345 ~ 5994810 (+)
G1703391 NA other upstream 1172994 5717199 ~ 5717701 (+)
G1704232 NA other downstream 115559 7007169 ~ 7007740 (+)
G1704409 NA other downstream 257790 7149400 ~ 7149993 (+)
G1704562 NA other downstream 765819 7657429 ~ 7657869 (+)
G1704651 NA other downstream 957950 7849560 ~ 7850120 (+)

Expression


Co-expression Network